Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01761 aTGAATACTTTATCAcaaaattctcaaaaaaaatCTGATGGGTCTCTTTCTAGTTTCACTGATTCTTCAAATGCTGAGTCTAGAAGAACAACTAGTTTTAGTGGATCTAATTCTAGCTCATCAATTTCTACTTCAGAAGAAGCTAAATCAAATGGGTTTTCTACTAATACTCCTCTTGGTTGGCCTATTCTTAAAGCTACACTTTCCAATTCCAAGCGTTTAAATTCTGATGAGAAAGAAAATAAGCACAAATCTAATTTGGAACACTCAAAATTTACCACCATTGATTTAAAAATCTCagATGTTGATATGATGAAGGAGAGGTTTGCCAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATTTCTAATGCCATTACTAATCTATGTGCTACTGCATTTGGGCAACTATGGAGACTAGAACCACTACCGtgtgagaagaaagaaatgtGGCGTCGAGAAATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACGTTTCCTGATGGAAAGAAACTCGAGGTAATGACTTGCAGACCTAGGACAGATATTTGTATCAACCTTCCAGCGCTTCGCAAACTTGATAACATGTTACTAGAAATATTAGACAGTTTCACGGCTACGGAATTTTGGTATGTTGATCAAGGAATTGTAGCTGCGGATGCAGATGGTTCGGGCTCTTTTCGCAAGTCAATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCCGTACCTCGCGTTCCACCTGAAGGTCTCAGTGAGAACTCAAGAAAGAATTTGAATCTCTCAAGAGAAAGTGCTAGTCAAATTCTCAAAGCAGCTATGTCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGACATATTTGGAAACACTCCCCAAGAATGGAAGAACTTGCCTAGGAGATTTTATTTACCGATACATCACATCCGATCAATTCTCGTCAGAGTGCCTGCTTGATTGCTTAGACTTATCTTCTGAACATACTGCACTCGAGATTGCGAACCGCCTAGAAGCTGCAATTTATGTATGGCGTCGAAGATCTCACCACAAACCATCACCTAGTCCCAATCGTTCAACGACAAAGTCATCATGGGGGATGGTCAAGGATTTCATGCTTGATGGAGATAAGAGAGAACTGCTAGCTAATAGAGCTGAAAACATTCTAAATTCATTGAAGAATCGGTTCCCGGGATTAACACAAACTACCTTGGATACCTGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTCTAGAAAGCTACTCTCGAGTTTTGGAGAGCATGGCTTTCAACATTGTATCACGCATCGATGATTTGTCATACGTGGATGACTTGACAAAACATTCAGATAAATTTGCATTGGTTCCTCATACAACAGTTAATATAGTTTCTCAGCAAAAGATTTCGCGTCCATTTTCAGTGTCCGTCTCAGGCACTCCACACAAAACAGCATTTGGCACACCTAAGTTTTCGCCTGTGCCATTGATTAGTCCTGTAAGAGGGGAGAGAACTCCTTTCCTccacaacaataacaacaacaatgtcAACAACATAAAACCTCAGCGTCGCGGCTTTGGGGTGAGAAGAGCGTTGTCAAATTATCTTGGTGTTGAGACTAAAACAAAGACCTGTACCAATTCAACTGAGGTTAATTGTTCAAACACAAATAGCAAGAAAACAGAACAGCCAGAACAACATCCTCAGAAGGAAACATGTACTGTGaaaaacaagacaaaataa 1803 0.3877 MNTLSQNSQKKSDGSLSSFTDSSNAESRRTTSFSGSNSSSSISTSEEAKSNGFSTNTPLGWPILKATLSNSKRLNSDEKENKHKSNLEHSKFTTIDLKISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAADADGSGSFRKSIQRQEEKWWLPVPRVPPEGLSENSRKNLNLSRESASQILKAAMSINSIALAEMEVPETYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHTALEIANRLEAAIYVWRRRSHHKPSPSPNRSTTKSSWGMVKDFMLDGDKRELLANRAENILNSLKNRFPGLTQTTLDTCKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLSYVDDLTKHSDKFALVPHTTVNIVSQQKISRPFSVSVSGTPHKTAFGTPKFSPVPLISPVRGERTPFLHNNNNNNVNNIKPQRRGFGVRRALSNYLGVETKTKTCTNSTEVNCSNTNSKKTEQPEQHPQKETCTVKNKTK 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01761 600 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 10 573 IPR038937 GO:0005085
Tsu03g01761 600 MobiDBLite consensus disorder prediction 568 582 - -
Tsu03g01761 600 ProSiteProfiles PRONE domain profile. 92 474 IPR005512 GO:0005085
Tsu03g01761 600 MobiDBLite consensus disorder prediction 583 600 - -
Tsu03g01761 600 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 100 468 IPR005512 GO:0005085
Tsu03g01761 600 MobiDBLite consensus disorder prediction 1 54 - -
Tsu03g01761 600 MobiDBLite consensus disorder prediction 568 600 - -
Tsu03g01761 600 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 10 573 - -
Tsu03g01761 600 Gene3D PRONE domain, subdomain 1 95 332 - -
Tsu03g01761 600 Gene3D PRONE domain, subdomain 1 333 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01761 Tsu-Chr3 18016372 18019681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01761 - - gmx:100796692 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01761 03 18016372 18019681 Tsu05g03265 05 43947423 43952402 ECH
Tsu03g01761 03 18016372 18019681 Tsu03g01761 03 18016372 18019681 ECH
Tsu03g01761 03 18016372 18019681 Tsu05g03265 05 43947423 43952402 PCT