Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01272 ATGGAGGATCAAGGTAATAGTAATACTTCCTTCGTCTTCAAGGCGAAAACTGTTATCCATTCTGCTGCTGCCAAAGCTGAACGTGTTATCAAGGACTTCAAATCTGATCTTGATTATGATAAGCAATTGCGTGACGATTGTGGAAGGCAAAGACATGAGGGAGCTGAACCTGCTAAGAATGAGAATGAGTCAAAGTTTCTGAGTGAATTGAAGCAAATTAAGTGGAAACCTCGAAATATAGGAGGAACAAAGCAGGAATGGAAAGATAGAATTAACAACATACGGAAAGGGCataaagaaaatgaagttaCAGAAAAAGTTGGAAATGCAAGCATGGCTGCTGTTCCACTTTATGATGAAGATATGTGCATTGTTCATGTGAAAAAGGATCTTGATGCCAATGTTTCAGAAGGATTTCTCTCGGTTGAAGGCTTAACTGCTGCGGCTAAAAGGCCTATTCCTCCATCTTCTGCCTTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGGAAAGCAAATTCAATGAAAGATTTTGCAGCTTCATCAGGAGGTTCTTCACCTTCCAAAGAGAGGGCAGGCTTAAGTCTCTCTGCGGTGAAGGCTTTAGTTTTACGCGGGAAAGAGTACAAACTTGCCTCTGAATTTAGTAGCAATGAGAAAGTTGTGTGTTTGATCTGTTCTCTTTTTGATCCAGAGGGAGATTTCCTTAGAAGGAAGATCAACTCCAAACCGGAGGAAATTGACGTAACATCTTTTGTAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTAATCGGAAGCTTTAAGACCCTTCGAGAGATGGCATTTTTTTGGTGCTGGTTTGTTGCTGAACTGAGAAAACTTTGGTCTAAAGAAAAACATTTGCCTGGAATCCCTCTCGATGAAATTCCAGATTTGAAGTCATGTCTTCTCTATCAACattttcaagtaattaattgtTGCATCTCTCGGAAACAGCGCCATGTCATTGCAACTGAATTGCTAGACTCTATGATGATGAAAGCAAACTCAAATACATTAGAATCAACAAACTGTGGAGAAGATGATACTTCTGCAAGTCGTTTGTTATATGCTCGATTAAGTACTGGAGAGCTTGCTCTTCGACTTGGTGCTCATTCTCCATCTGGAAATATGACATTATTGGAAACCGGAGAGCCTGCATACTCTCCTATCACCCAGGAAGGAGTGTTGCTTACAGAAGATATCATCAAAGAGAACGAGGAGTTTATGCTGCGGACAGGGAGTCTCGGTGCCGGGTGCTCTCAACTCCTGTCTGATATGCAGGCTTTTAAGGCTGCAAATCCTGGTTGTATTTTGGAAGACTTTGTGAGATGGTACTCTCCTCCTGATTGGATCGAAAGCGAAGCAAGTACTGAAGATAGTTCTTCTTCTGATGGTAGTGGTAGCGAGTCTTTGTCCACCAGAGGTCGTCTAAGTCGACGGATGCGGAAAGAAGGTAATTTGTGGCGCGAATTTTGGGAAACATCTAAGCCAGTACCTGCTGTGAAACAGGCACCTCTCTTTGACGAGGATTTGGCAGTGGAAGGGATTCTTGATGCATTTGAGGACATTCAGCCAGTTGAGCTTTTTGGGCAGCTGTTTGTTTCACTGCTTGGTTTAGGATTTGCAATTGCTGAACCATTGCTTTCTGGTAACGAAGACTTCTCGAAGTTGTTCAATGACTGCAAAGAGTATGTGGTTACTTCTTGTCAAAGCATCAGATTCAGCGAGAAAGTTGATGAACTTGTTCAGGTATATGAAACAGTGGAGACAATGTTGCTGAATCCTGAGGAGGCACTAAAGATGATGAACCCTTCAGAAGAATCAACTGTGACTACAGGTGAAACAAAGTGTCGGTTCAAGAAGCTTAGCCATATCTTTGCCGGCGAAGATAAACTTTTGTCAAGGTCTTTTCTGAAAGATAAGATCAACGATGAAGAAAAGAAGATTCGACAATCTTTTTCGAGTTTCTTTGACAAGAAGTCGACCTTATTCTCGAAGAAACCTCCCAAAGGTGAAAACTCTGCTGAAACAACTCCCTCTCTTGAAAATGATTGGACAATAGTTCAGCTTCACATGTAG 2124 0.4138 MEDQGNSNTSFVFKAKTVIHSAAAKAERVIKDFKSDLDYDKQLRDDCGRQRHEGAEPAKNENESKFLSELKQIKWKPRNIGGTKQEWKDRINNIRKGHKENEVTEKVGNASMAAVPLYDEDMCIVHVKKDLDANVSEGFLSVEGLTAAAKRPIPPSSALKQLAIAVEAGRKANSMKDFAASSGGSSPSKERAGLSLSAVKALVLRGKEYKLASEFSSNEKVVCLICSLFDPEGDFLRRKINSKPEEIDVTSFVKDIHGAPPESLVVKLAEVIGSFKTLREMAFFWCWFVAELRKLWSKEKHLPGIPLDEIPDLKSCLLYQHFQVINCCISRKQRHVIATELLDSMMMKANSNTLESTNCGEDDTSASRLLYARLSTGELALRLGAHSPSGNMTLLETGEPAYSPITQEGVLLTEDIIKENEEFMLRTGSLGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWIESEASTEDSSSSDGSGSESLSTRGRLSRRMRKEGNLWREFWETSKPVPAVKQAPLFDEDLAVEGILDAFEDIQPVELFGQLFVSLLGLGFAIAEPLLSGNEDFSKLFNDCKEYVVTSCQSIRFSEKVDELVQVYETVETMLLNPEEALKMMNPSEESTVTTGETKCRFKKLSHIFAGEDKLLSRSFLKDKINDEEKKIRQSFSSFFDKKSTLFSKKPPKGENSAETTPSLENDWTIVQLHM 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01272 707 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 9 703 - -
Tsu03g01272 707 MobiDBLite consensus disorder prediction 468 493 - -
Tsu03g01272 707 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 9 703 IPR045700 GO:0005096|GO:0043547
Tsu03g01272 707 MobiDBLite consensus disorder prediction 468 489 - -
Tsu03g01272 707 Pfam Rab3 GTPase-activating protein catalytic subunit 381 536 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01272 Tsu-Chr3 12181266 12186673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01272 K18270 - gmx:100800515 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01272 03 12181266 12186673 Tsu05g03875 05 49812606 49818001 PCT