Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01186 ATGAAGCTTGAAAGCTTGCTTAGCATGAAAGGTGGTAAAGGAGATGCTAGCTATGCCAATAATTCTCAAGGACAGGCCATACATGCAAAGTCAATGCTTCATCTTCTAAAAGAAGCATTAGATGGAGTTTACCTTCATGACCCTAACATTCCAtttgtggttgtggatttgGGTTGTTCATGTGGAATCAACACTATCAATGTTATTGATGTGATCATAAAAGACATCACTAAACGTTATGAAGCATTAGGATTCAATCCACCTGAATTCTCTGCTTTCTTCTCTGATCTTCCAAGTAATGACTTTAATACCCTTTTTCAACTCCTTCCTCCATTTGCTAACTATGGTGTTAGTATGGAAGAGTGTCTTGCTGCCAACAACCACCGCTCGTACTTTGCTGCTGGTGTCCCCGGCTCTTTTTATCGGAGACTTTTTCCGGCTAGGTCGGTTGATGTTTTTCACTCTGCATTTTCTCTGCATTGGTTATCTCAGGTACCAGATTCTGTTCAAGACAGGAGATCAAATGCATACAACAAAGGAAGAGTTTTTATCCATGGTGCTAATGACATAACAGCAAATTCTTACAAGAAACAATTCCAAACAGATTTGGCAGGTTTTCTTAGGTCAAGATCAATAGAGATGAAAAGTAAGGGGTCCATGTTCTTGGTTTGTTTGGGCAGGACTTCAGTGGACCCAACAGACCAAGGTGGGGCTGGTCTCCTTTTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGGTTAATTAGCAATGAGAAAAGAGACAGTTTCAACATTCCAATTTATGCACCAAGCCTACAAGATTTCAAGGAAGTGGTTGAAGCTGATGGATCATTTTCCATAAACAAACTTGAAGTTTTCAAAGCAGGAAGCCCTCTAGTGGTTAACCAACCAGATGATGCAAGTGAAGTAGGAAGAGCTCTAGCCAACAATTGTAGGAGTGTTTCTGGTGTTCTTGTTGATGCTCATATTGGTGATAAGCTTAGTGAGGAACTTTTCCTTAGAGTGGAGAAAAGAGCCACAAATCATGGCAAAGAGTTATTAGAGAAGCTTCAATTCTTTCACATTGTTGCATCCCTTTCTTTTGCTCAGTGA 1125 0.4 MKLESLLSMKGGKGDASYANNSQGQAIHAKSMLHLLKEALDGVYLHDPNIPFVVVDLGCSCGINTINVIDVIIKDITKRYEALGFNPPEFSAFFSDLPSNDFNTLFQLLPPFANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPDSVQDRRSNAYNKGRVFIHGANDITANSYKKQFQTDLAGFLRSRSIEMKSKGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISNEKRDSFNIPIYAPSLQDFKEVVEADGSFSINKLEVFKAGSPLVVNQPDDASEVGRALANNCRSVSGVLVDAHIGDKLSEELFLRVEKRATNHGKELLEKLQFFHIVASLSFAQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01186 374 Pfam SAM dependent carboxyl methyltransferase 50 370 IPR005299 GO:0008168
Tsu03g01186 374 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 372 IPR005299 GO:0008168
Tsu03g01186 374 Gene3D - 7 353 IPR042086 -
Tsu03g01186 374 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 2 372 - -
Tsu03g01186 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 371 IPR029063 -
Tsu03g01186 374 Gene3D Vaccinia Virus protein VP39 21 300 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01186 Tsu-Chr3 11121053 11125133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01186 K18848 - gmx:100801476 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01186 03 11121053 11125133 Tsu05g03912 05 50132734 50137062 PCT