Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01136 ATGGATTCTCCACAATCTGTTGTGTCACCCTTCAGAACCTCAATCTTGGGTGAAGGTGAGAAGCAAAAGTCTGATGTTTTAACACAAAGCAATGGTCCTTCCTCGAAGGACATTGAAGTCAATGGAAAGGAAACTATCATGTCAAATGCCGAGGAATGCGTTGGAGTGCTTGAGGTTTACATACATCAGGCTAGAGACATTCAGAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTACCTGACAAATAATCCCGAGAACACTGTATCTACCAAGACTATCAATGGAGGAGGAAGGAACCCCGTGTTTAATGACAATCTTCGTCTCAATGTTTGGGATGTCAATTCTTCTCTCAAATGTGAGTTATGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTCGGTTTTGCTTTGGTACCATTGTCGGAAGTACTAGTTCAGAATGGGAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTGTTTCATTCTCCTTCAGGTTTTGTTCAGTTGTCAATTGCTTATACTGGTGCTACACCTGATGTTATGGCAATATCTGAAATGCCGGGGAAAGTGGCAAATCATGTGACTGTGCAGGACTCGGAAACATCTGAGTCATTGGCCAGAGATTTGGATAAAATTGAGTTTCCAGATCCTAAGATTGTAAACGAAGACCACTTAATGGTTTCAGAATATTTTGGCATTTCGTGTGAGGAGGCTCAGTGCTCTGATAGCTTGGCCACTTCTGAAGCTGATGATCATAGTTCTGAAGCAGGTGTTCGTCTTGTGGAAAGCTTCTCGGCATGCAGTGAAGAGTCTGTGCAAGTGCAACCTCCTAAGGTTACAGGGAATATAACTTTGTACTCTCACAAGCTTGTTGCTATCTTAACTGTTACATGA 921 0.4159 MDSPQSVVSPFRTSILGEGEKQKSDVLTQSNGPSSKDIEVNGKETIMSNAEECVGVLEVYIHQARDIQNICIYHKQDVYAKIYLTNNPENTVSTKTINGGGRNPVFNDNLRLNVWDVNSSLKCELWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSIAYTGATPDVMAISEMPGKVANHVTVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGISCEEAQCSDSLATSEADDHSSEAGVRLVESFSACSEESVQVQPPKVTGNITLYSHKLVAILTVT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01136 306 PANTHER EXPRESSED PROTEIN 1 290 - -
Tsu03g01136 306 ProSiteProfiles C2 domain profile. 42 161 IPR000008 -
Tsu03g01136 306 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 290 - -
Tsu03g01136 306 SMART C2_3c 56 159 IPR000008 -
Tsu03g01136 306 MobiDBLite consensus disorder prediction 23 39 - -
Tsu03g01136 306 Pfam C2 domain 55 162 IPR000008 -
Tsu03g01136 306 Gene3D C2 domain 50 212 IPR035892 -
Tsu03g01136 306 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 54 184 IPR035892 -
Tsu03g01136 306 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01136 Tsu-Chr3 10709314 10711354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01136 - - gmx:100804602 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01136 03 10709314 10711354 Tsu05g03961 05 50581019 50583904 PCT