Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00998 ATGGATATGAAACACTCTCTCCAATTAACGACTACTTCCGGTGCCTATGATGATGATGGACGTCCCAAAAGAACTGGAAATTTAAATAGTGCTGTGGCTCATATCATAACGGCGGTTATCGGTTCTGGTGTTTTGTCTTTGGCGTGGAGTATTGCTCAATTAGGATGGATTGGAGGGCCAGTTGCCTTGCTTTGTTGTGCGATATCTACATATGTTTCTTCGAGTCTTTTGGCTGATTGTTACAGAAGTCCTGACTCTATAACCGGGAAAAGAAACTACTCTTTTATGGATGCTGTTAGAGTAAATCTTGGTAAGAAAAGGACAATTGCGGTTGGTTTCCTTCAAATTGTGAGCTTGTATGTGACTAGTACTGCCTATGTAATTACTGCGGCAACAAGTATAAGGGCTATTTTGAGATCAAATTGTTATCACGAGGAAGGGCACGATGCTCCTTGTAAATATGGCGATCTCCATAGCATGGTATGGGTTTCTGTTGTTGCTTCAATAATGTCCTTTGCATACTCATCCATTGGACTAGGACTCGGCGTCGCAACAGTCATAAAAAATGGAAGATTTATGGGAAGTATGACAGGAGTACAGACTGCAAATGTTGCTGACAAAATCTGGTTAATCTTCCAGGCAATTGGTGACATTAGCTTTTCCTATCCATACTCAATGCTCTTTCTTGAGATACAGGACACTCTAGAGTCAACTCCACCAGAGAATAAAACTATGAAAAAGGCCTCCatggtttcaattttcattaCAACATTCTTCTACCTATGTTGTGGAGGCTTTGGATATGCAGCTTTTGGAAACGATACACCAGGAAATCTCTTGACAGGGTTCGGGTTTTACGAGCCTTTCTGGCTTATTGACTTTGCCAATGTTTGCATTATCATTCATTTGGTTGGAGGATATCAGGTATACAGTCAACCAATATATAGTACTATTGATAGATGGTGTTCAACAAAATTTCCGAAGAGTGGCTTTGTGAATGATTTTCACAGAGTGAAACTTCCTCTATTACCTGCTTTTAAGATAAATCTATTCAGGTTCTGTTGTAGAACAAGCTATGTGATTTCAACAACAGGACTTGCAATTTTATTCCCTTACTTCAACCAAGTTCTAGGAGTATTAGGAGGCATAAATTTCTGGCCATTGGCAATATATTTTCCAGTTGAGATGTACTTTGTACAGAAGAAAATTGAAGCTTGGAGTACACAATGGATTGTTCTAAGGATATTTAGCTTTGCTTGCTTTCTTGTCACAATGATGGGATTTATTGGATCATTTGAAGGAATCATACGTGCCAAACTTAGCTAA 1326 0.3876 MDMKHSLQLTTTSGAYDDDGRPKRTGNLNSAVAHIITAVIGSGVLSLAWSIAQLGWIGGPVALLCCAISTYVSSSLLADCYRSPDSITGKRNYSFMDAVRVNLGKKRTIAVGFLQIVSLYVTSTAYVITAATSIRAILRSNCYHEEGHDAPCKYGDLHSMVWVSVVASIMSFAYSSIGLGLGVATVIKNGRFMGSMTGVQTANVADKIWLIFQAIGDISFSYPYSMLFLEIQDTLESTPPENKTMKKASMVSIFITTFFYLCCGGFGYAAFGNDTPGNLLTGFGFYEPFWLIDFANVCIIIHLVGGYQVYSQPIYSTIDRWCSTKFPKSGFVNDFHRVKLPLLPAFKINLFRFCCRTSYVISTTGLAILFPYFNQVLGVLGGINFWPLAIYFPVEMYFVQKKIEAWSTQWIVLRIFSFACFLVTMMGFIGSFEGIIRAKLS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00998 441 PANTHER OS05G0424000 PROTEIN-RELATED 10 439 - -
Tsu03g00998 441 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g00998 441 Pfam Transmembrane amino acid transporter protein 25 436 IPR013057 -
Tsu03g00998 441 MobiDBLite consensus disorder prediction 1 15 - -
Tsu03g00998 441 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00998 Tsu-Chr3 9243600 9246172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00998 17 438 Organic Solute Cotransporters AT1G10010 49.663 1.08e-162 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00998 K24917 - gmx:100818535 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g04115 05 51828734 51832579 Tsu03g00998 03 9243600 9246172 PCT