Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00996 ATGGATGTGAAACACTCTCTACAATTAACGACTACTTCGGGTGCCTATGATGATGATGGACGTCCGAAAAGAACTGGAAATTTAAATAGTGCTGTGGCTCATATCATAACGGCGGTTATCGGTTCCGGAGTTTTGTCTTTGGCATGGAGTATTGCTCAATTAGGATGGATTGGAGGGCCAGTTGCCTTGCTTTGTTGTGCAATATCTACATATGTTTCTTCGAGTCTTTTGGCTGATTGTTATAGAAGTCCTGACTCTATAACCGGCAAAAGAAACTACTCTTTTATGGATGCTGTTAGAGTAAATCTTGGTAAGAAAAGGACAATTGCGGTTGGTGTCCTTCAAATTGTGAGCTTGTATGTGAATTGTACTGCCTATGTAATTACCGCGGCAACAAGTATAAGGGCTATTTTGAGATCAAATTGTTATCACGAGGAAGGGCACGATGCTCCTTGTAAATATGGGGGTAATTTGTATATGATGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCAGATCTCCATAGCATGGTATGGGTTTCTGTTGTTGCTTCAATAATGTCCTTTGCATACTCATCCATTGGACTAGGACTCGGCGTCGCAACAGTCATAAAAAATGGAAGATTGATGGGAAGTATGACAGGAATACAGACTGCAAATGTTGCCGATAAAATCTGGTTAATCTTCCAGGCAGTTGGTGACATTAGCTTTTCCTATCCATACTCGATGATCTTTCTTGAGATACAGGACACTCTAGAATCAACTCCACCAGAGAATAAAACGATGAAAAAGGCCTCCatggtttcaattttcattaCAACATTCTTCTACCTATGTTGTGGAGGCTTTGGATATGCAGCTTTTGGAAATGATACACCAGGAAATCTCTTGACAGGGTTTGGGTTTTACGAGCCTTTCTGGCTTATTGACTTTGCCAATATTTGCATTATCATTCATTTGGTTGGAGGATATCAGGTATACAGTCAACCAATATATAGTACTATTGATAGATGGTGTTCAACAAAATTTCCCAAGAGTGGCTTTGTGAATAATTTTCACAGAGTGAAGCTTCCTCTATTACCTGCTTTTAAGATAAATCTATTCAGGTTCTGTTGTAGAACAAGCTATGTGATTTCAACAACAGGACTTGCAATTTTATTTCCTTACTTCAACCAAGTTCTAGGAGTATTAGGAGGCATAAATTTCTGGCCATTGGCAATATATTTTCCAGTTGAGATGTACTTTGTACAGAAGAAAATTGAAGCTTGGAGTACACAATGGATTGTTCTAAGGATATTTAGCTTTGCTTGCTTTCTTGTCACAATGATGGGATTTATTGGATCATTTGAAGGAATCATACGTGCCAAACTTAGCTAA 1383 0.3825 MDVKHSLQLTTTSGAYDDDGRPKRTGNLNSAVAHIITAVIGSGVLSLAWSIAQLGWIGGPVALLCCAISTYVSSSLLADCYRSPDSITGKRNYSFMDAVRVNLGKKRTIAVGVLQIVSLYVNCTAYVITAATSIRAILRSNCYHEEGHDAPCKYGGNLYMMLFGLVQIVMSFIPDLHSMVWVSVVASIMSFAYSSIGLGLGVATVIKNGRLMGSMTGIQTANVADKIWLIFQAVGDISFSYPYSMIFLEIQDTLESTPPENKTMKKASMVSIFITTFFYLCCGGFGYAAFGNDTPGNLLTGFGFYEPFWLIDFANICIIIHLVGGYQVYSQPIYSTIDRWCSTKFPKSGFVNNFHRVKLPLLPAFKINLFRFCCRTSYVISTTGLAILFPYFNQVLGVLGGINFWPLAIYFPVEMYFVQKKIEAWSTQWIVLRIFSFACFLVTMMGFIGSFEGIIRAKLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00996 460 PANTHER OS05G0424000 PROTEIN-RELATED 10 458 - -
Tsu03g00996 460 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g00996 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 458 - -
Tsu03g00996 460 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
Tsu03g00996 460 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00996 Tsu-Chr3 9217285 9228987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00996 17 442 Organic Solute Cotransporters AT1G77380 53.972 2.21e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00996 K24917 - gmx:100818535 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00996 03 9217285 9228987 Tsu05g04115 05 51828734 51832579 PCT