Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05576 atggatgttCCGCAAGGACTCATCACTATATATTCACAAACCAAACTCTTCTTATTGCAATTGCAACGTTCACCGTTCGCCGTTGATTTCTCTCTCTGCTGTCTCACTCTATCGCCTCCGCACTCAAAGGACTGCACCTGCTTTACTGTCATGGAATTGCCGAATTTAGAAACACAACCCAATAAGCGTAGGAGAAAGAAATCTTCTGTATGGGAACACTTCACTGTGGAAAAAACTGATGAACCAGGATGTATCAGGGCTTGCTGTAACAGGTGCAAAAAATCGTTTGCTTATATGAAAGGTTCTAAACAATCTGGCACCAGCCATCTCAATAGGCACATTACTCTGGGAATATGTCTGAGAAATCAGCAAACCAGGTGTTCCAAAACTGGTGCTGAACCACGTAAGACGCAACCTAGACCAAAACCTTACATTGCTTCTATGTCATTTGATCAGGAGCATTGCAACGATAAGATTGCCAAAATGATTATTTTACATGATTATCCACTTCATATGGTGGAACACAAAGGTTTCATTGATTTTGCACGGGCACTTCAACCACAGTTCAACCCGCTGAGCTTAAATACTGTCCAAGGGGATTGTGTTGCCATTTACCTCAGAGAGAAGCAAAACCTTCTGAATCTTATTGCCGGGATTCCTGGACGAGTCAACCTCACTTTGGACTTATGGACTTCAAATCAGTCATCGGGCTATGTTTTTCTTCGTGGGCACTTCATAGATGGTGATTGGAACTTACATCATCCCATTCTTAATGTTTTTGAGGTGCCATTTCCTGATTTGGATGGTTCCTTAAATCAAACTATAGTGACGTGCCTAAAGAATTGGCATTTAAAGGATCGCCTGTTTTCCATTCTATTTCATAAACCCTTTTTCAATGAGACTTTGATGGGAAATATGAATGATCTTCTCTCTCTTAAGAACCCTGCGATCCTCAACGGTGAATTATTAAGACAAAATTGTTATGCTCGCATGCTTAATGGCCTTGCATTAGATGCTCTTCGGTCAATGCAAGAAACAATTACTAAAGTTCGCCAGAGTGTACAATATGTGAAATCTTCAAAATCGATTGAAGAGAGATTTTTGCAATTTAAGCAACAACTTGGAGTTCCTAGTAAGATGGATCTTTTAAttgatgacaaaaataaatggGACACAGTCTACCATATGCTTGTCGCTGCCAGTGAATTAAAAGAAGTTTTTACTTGTTTTGAGGCTTTTGATCCCGATTACAGAATTTCCATTAcaatggatgattggaagcaggtAGAAAATCTATGTGCATGTTTGAAGTTTTTGTATGATGCTGCTCAATTTTTAACCATCCAACCGTACCCAACTGCAAACTTATTTTTCCTCGAAATGGCCCAACTTGAGGTGAAGTTGACTGAGGCGAGCCAGGATCCTTTCTGTTGTAGTTTGATTATATCTCTGCAAGAGCAGTTTGATTGGTATTGGAACAAAAGCTGCTTCATCTTAGCAATTGCTGTAGCCATGGATCCGAGGTACAAAATGAAACTTGTGGAATCCACTTTTGCTCAGATATTTGGTGAGAATGCTGAGTCGATAAAAATGGTTGAGAATAGTCTTGATGAACTGTTCCTCGAATATAGTATCATACAGGTGCTTCCTTTTACCGAAACAAATTTTGATATCGGGAACGACATTATGATGAGAACTGATGCATTTCAAGAAGTATCATTTGACGGATCTTTTTTTTCTGCTGAAGATGGACTTCCCGATATTGATTTCTGTATTTCTGAACTCACTACTAACCAGCAGATTAAGTCAGAATTGATGGAATATCTTGAAGAGCCTCTAGAGCCTAGTGTACAAGAATTTGATGTTCTAGGGTGGTGGAGAATTAATGGATACAAGTACCCAACATTGTGCAGAATGGCATCTGATATTTTGTCTATGCCAGTATCTACTCTCTCCGCAGATTCTATTTTCGACACAGAAATTAGAAAAATGGACAACTACAGGAGTTCATTAGACTCTCTGACTCTTGAGGCCCTTATATGTACTAAGGATTGGTTCCACTGTGAATCAAAACCCATTGATGTTTCACATGAACTTGTGAAAATGGAGCATTAG 2115 0.3849 MDVPQGLITIYSQTKLFLLQLQRSPFAVDFSLCCLTLSPPHSKDCTCFTVMELPNLETQPNKRRRKKSSVWEHFTVEKTDEPGCIRACCNRCKKSFAYMKGSKQSGTSHLNRHITLGICLRNQQTRCSKTGAEPRKTQPRPKPYIASMSFDQEHCNDKIAKMIILHDYPLHMVEHKGFIDFARALQPQFNPLSLNTVQGDCVAIYLREKQNLLNLIAGIPGRVNLTLDLWTSNQSSGYVFLRGHFIDGDWNLHHPILNVFEVPFPDLDGSLNQTIVTCLKNWHLKDRLFSILFHKPFFNETLMGNMNDLLSLKNPAILNGELLRQNCYARMLNGLALDALRSMQETITKVRQSVQYVKSSKSIEERFLQFKQQLGVPSKMDLLIDDKNKWDTVYHMLVAASELKEVFTCFEAFDPDYRISITMDDWKQVENLCACLKFLYDAAQFLTIQPYPTANLFFLEMAQLEVKLTEASQDPFCCSLIISLQEQFDWYWNKSCFILAIAVAMDPRYKMKLVESTFAQIFGENAESIKMVENSLDELFLEYSIIQVLPFTETNFDIGNDIMMRTDAFQEVSFDGSFFSAEDGLPDIDFCISELTTNQQIKSELMEYLEEPLEPSVQEFDVLGWWRINGYKYPTLCRMASDILSMPVSTLSADSIFDTEIRKMDNYRSSLDSLTLEALICTKDWFHCESKPIDVSHELVKMEH 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05576 704 PANTHER BED FINGER-RELATED 54 692 IPR045259 -
Tsu02g05576 704 SMART bed5 65 122 - -
Tsu02g05576 704 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 54 692 - -
Tsu02g05576 704 Pfam Domain of unknown function (DUF4413) 450 543 IPR025525 GO:0003677
Tsu02g05576 704 ProSiteProfiles Zinc finger BED-type profile. 65 126 IPR003656 GO:0003677
Tsu02g05576 704 Pfam hAT family C-terminal dimerisation region 604 686 IPR008906 GO:0046983
Tsu02g05576 704 SUPERFAMILY Ribonuclease H-like 216 687 IPR012337 -
Tsu02g05576 704 SUPERFAMILY beta-beta-alpha zinc fingers 68 116 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05576 Tsu-Chr2 63993072 63997115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05576 - - gmx:106796308 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05576 02 63993072 63997115 Tsu02g05576 02 63993072 63997115 ECH
Tsu02g05576 02 63993072 63997115 Tsu06g00188 06 1575325 1577376 PCT