Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05542 ATGGAAGCCATAACAGAAGGAGTTAACAACAtcaacattaataataataactctaACTCCGATTCGTATAAGAAGAATCGCATTCAAGTTTCTAACACCAAGAAACCACTCTTCTTCTATGTTAATCTCGCCAAGAGATATATGCAACAGCATAATGAGGTGGAACTCTCAGCACTAGGAATGGCTATTGCGACAGTGGTAACTGTTgctgaaattttgaaaaataatggGCTTGCCATTGAAAAGAAAATCATGACATCAACCGTCGACATAAAGGATGATTCTAGAGGTAGACCAGTCCAAAAGGCCAAGATTGAAATAGTACTTGGGAAGACAGCAAATTTCGATGAACTGATGGCAGCTGCAGCTGCTGAAGATGGCGAAAATGGAGATGTTGAAGAACATACTGCATGA 414 0.3671 MEAITEGVNNININNNNSNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAIEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGDVEEHTA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05542 137 SUPERFAMILY AlbA-like 25 120 IPR036882 GO:0003676
Tsu02g05542 137 PIRSF UCP030333_Alba 1 137 IPR014560 -
Tsu02g05542 137 Pfam Alba 26 84 IPR002775 GO:0003676
Tsu02g05542 137 Gene3D - 24 135 IPR036882 GO:0003676
Tsu02g05542 137 MobiDBLite consensus disorder prediction 7 23 - -
Tsu02g05542 137 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g05542 137 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 131 IPR014560 -
Tsu02g05542 137 PANTHER - 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05542 Tsu-Chr2 63766787 63768852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05542 - - gmx:100527472 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05542 02 63766787 63768852 Tsu02g05542 02 63766787 63768852 ECH
Tsu02g05542 02 63766787 63768852 Tsu06g00220 06 1817117 1819777 PCT