LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g05519	ATGTGGCGGAGACTCTTCTCTTCTCCTCACCTCAAAACCCTAACTCACTCTTATTCAAATCCCCGATCCGCCGTCGCCGGACTCCGATCCCTCGACCTCACCCGTCACGTCGCCACACAATCAGCTGGTTCAATCAAAAAGACAGTTGAGGATGTAGTTCCAATCGCTACCGGTCATGAACGGGAGGAGATTCAGGCCGAGCTTGAGgGAAGAAATATTCTTGCAATAGACAATCCAGAAGGTCCTTTTGGCACAAAGGAATCACCTGCTGTTGTTAGTTCTCACTATGACAGAAGGATAGTTGGATGCCCGGGTGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCCCATGAATGTCCAGTGTGTGCACAATATTTTGAGCTTGAAGTGGTGGGACCTGGTGGTGATCCTTATGGACACCATTGA	450	0.4956	MWRRLFSSPHLKTLTHSYSNPRSAVAGLRSLDLTRHVATQSAGSIKKTVEDVVPIATGHEREEIQAELEGRNILAIDNPEGPFGTKESPAVVSSHYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFELEVVGPGGDPYGHH	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g05519	149	SUPERFAMILY	Rubredoxin-like	45	142	-	-
	Tsu02g05519	149	CDD	Cyt_c_Oxidase_Vb	46	141	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Tsu02g05519	149	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	148	-	-
	Tsu02g05519	149	Pfam	Cytochrome c oxidase subunit Vb	52	145	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Tsu02g05519	149	Gene3D	Cytochrome c oxidase, subunit Vb	45	139	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Tsu02g05519	149	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	148	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Tsu02g05519	149	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	44	143	IPR002124	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu02g05519	Tsu-Chr2	63518115	63522135	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g05519	K02265		-	gmx:100780886	223.787

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu06g00235	06	1926520	1931733	Tsu02g05519	02	63518115	63522135	ECH
	Tsu02g05519	02	63518115	63522135	Tsu02g05519	02	63518115	63522135	ECH
	Tsu02g05519	02	63518115	63522135	Tsu06g00235	06	1926520	1931733	PCT