Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05494 ATGGAGTTGATTTCAGGTTTACCAGAAGACATAGCAAGAGACTGTTTGATTCGTGTTTCATACCAGCAGTTTCCGGTGGTAGCCTCCGTGAGCAAAGGGTGGAACACGGAGATTCAGTTGCCGGAGTTTCACCGTGTAAGGAAGAGCACCGGACATGCTCAGAAAATCCTTGTCACGGTTCAGTCTgaatttgattcagaaaaatgtAAAACCGGTTCACTTGTTAAGGCTATGACTATGACGAACCCGGTTTATAAATTGAACGTATTAGAAACTGAAACGGGTATTTGGGGCGAGTTACCAATGGGACCCGAATTAAGTAATGGGTTACCCTTATTTTGTCAGATTGCGGGTGTCCGGTTTGATCTTGTTGTTATGGGTGGGTGGGCCCCAGATTCGTGGAAAGCATCAAATTCggtgtttatttataattttttatctgCTAAGTGGCGTCGTGGGGCCGATATGCCTGGTGGCCCCCGCACATTTTTCTCTTGCGTGTCAGATCATCAACGTATGATCTACGTGGTGGGAGGACACGATGAGGAGAAAAATGCGTTGAAGTCAGCATTTGTTTATGATGTGGCAAGTGACGTGTGGGTACAACTTCCTGATATGGCGAGGGAGCGCGATGAATGCAAAGCTGTGTTTTGCCGCAGTGTTAGTGGCTCTGGCACAATTAGGGTGGTTGGCGGATATTGCACGGAGATGCAAGGGCGGTTTGAAAGGAGTGCAGAGGAGTTCGATGTTGCCACGTGGAAGTGGGGTCCAGTGGAGGACGAGTTTTTGGATGATGCCACGTGTCCGAGGACTTGTGTGGATGGTTGTGATGTGGAGGGGATAATGTACATGTGTAAGGGTGATGACGTGGTTTCATTCGAAGGCAACACGTGGCAGGTGGTGGCCAAGGTGCCTAGGGAGATAAGAAATGTTGCATGTATGGCAGCTTGGGAAGGGGCATTATTGTTGATTGGGTCATGTGGGTTTGGGGAACCTTATATGGGCTTTGTGTTGGGCCTAAAGAGTGGTGTTTGGACTAAACTTGAGAGCCCAGAAAACTACACTGGCCATGTTCAGTCTGGTTGCCTTTTGGAGATTTAG 1101 0.4687 MELISGLPEDIARDCLIRVSYQQFPVVASVSKGWNTEIQLPEFHRVRKSTGHAQKILVTVQSEFDSEKCKTGSLVKAMTMTNPVYKLNVLETETGIWGELPMGPELSNGLPLFCQIAGVRFDLVVMGGWAPDSWKASNSVFIYNFLSAKWRRGADMPGGPRTFFSCVSDHQRMIYVVGGHDEEKNALKSAFVYDVASDVWVQLPDMARERDECKAVFCRSVSGSGTIRVVGGYCTEMQGRFERSAEEFDVATWKWGPVEDEFLDDATCPRTCVDGCDVEGIMYMCKGDDVVSFEGNTWQVVAKVPREIRNVACMAAWEGALLLIGSCGFGEPYMGFVLGLKSGVWTKLESPENYTGHVQSGCLLEI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05494 366 Pfam F-box domain 4 43 IPR001810 GO:0005515
Tsu02g05494 366 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 366 - -
Tsu02g05494 366 SMART kelc_smart 173 220 IPR006652 GO:0005515
Tsu02g05494 366 SMART kelc_smart 122 170 IPR006652 GO:0005515
Tsu02g05494 366 PANTHER OS02G0208700 PROTEIN 1 366 IPR044595 GO:0080037|GO:2000762
Tsu02g05494 366 Gene3D - 54 360 IPR015915 GO:0005515
Tsu02g05494 366 SUPERFAMILY Kelch motif 82 334 IPR015915 GO:0005515
Tsu02g05494 366 Pfam Kelch motif 172 206 IPR006652 GO:0005515
Tsu02g05494 366 Pfam Kelch motif 123 157 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05494 Tsu-Chr2 63269375 63271127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05494 - - gmx:100786398 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05494 02 63269375 63271127 Tsu02g05494 02 63269375 63271127 ECH
Tsu02g05494 02 63269375 63271127 Tsu06g00258 06 2156034 2157762 PCT