Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05368 ATGGCATCATTCTGTGCTGTCAAATTCCTGCTCTGCTTCTTTATAATATGGTTCATCAATTTTCTACCTCTATGCCAAGGTAAAGAGAACAATGGATATAAgtatccttttataaaaaaagcaaGTTCATTCTCATCTCCACCATCAATTTCAACTACCAACACAAATGATGGTTATGACTACATAATAGTAGGTGGTGGTACAGCAGGGTGCCCTTTAGCTGCAACCCTTTCAAAGAACTTCAATGTTTTGTTACTTGAAAGAGGAGGAGTACCTTTCACAAACCCCAATGTGTCATTTCTTGACAACTTTCACATTACATTGGCTGATACTTCACCAACTTCAGCTTCACAATTCTTCATGTCAACTGATGGAGTTTACAATGCAAGAGCAAGAGTTTTGGGGGGTGGTAGTGCCATTAATGCTGGCTTCTACACTAGAGCTAGCTCAAGATTTATACAGAAGATGGGTTGGGATGCAGAGCTAGTAAATAAGTCATATCCTTGGGTTGAAAAACAGATTGTTCATCGTCCAACATTTTCACATTGGCAAAGAGCATTGAGGGATGGTCTTCTAGATGCTGGTGTGTCTCCTTTTAATGGTTTCACCTATGAACATAAGTATGGAACCAAACTTGGTGGAACCATTTTTGACAGATTTGGTCGACGTCACACTGCTGCTGAATTGCTTGCTTCTGGAAATCCTAACAAACTCACTGTTTTGATCTATGCCACTGTCCAAAAGATTGTTTTTTATACAACAGGAAAAAGACCAAAAGCTATGGGGGTAATtttcaaggatgaaaatggGAAACAACACAAGGCAATTCTAGGAAATGATAGGCAAAATGAAGTAATTGTATCAAGTGGAGCAATTGGGACTCCTCAAATGCTATTGCTAAGTGGAATTGGCCCAAAAGCAGAACTTGAGAAGTTGAAAATCCCTGTGGTACTTGACAACAGATTTGTTGGAAAAGGCATGGTTGATAACCCAATGAACACAATATTTGTTCCTCTTAAGAAACCAGTTAAGCAGTCACTTATAGAAACAGTTGGTATTACCAATAGGGGTGTGTATATTGAAGCTAGCAGTGGGTTTGGACAGTCCAGTGACAGCATTCACTGTCACCATGGCATGTTATCAGCTGAAATTGGACAGCTCTCCACAATTCCTCCAAAGCAAAGATCAGAAGAAGCTATTAAAGCTtttatgaagaacaaaaaagaCATTCCAATTGAAGCATTTAAGGGAGGCTTCATCTTAACAAAAGTTGCCAATCCATGGTCAACAGGTGATCTCAGATTGGTCAACACCAATGTGGATGACAACCCTGCTGTTACCTTCAACTACTTCAGTCACCCTGCTGATCTTCAACGCTGCGTCGAGGGAATCCAGTTAGTAACAAAGGTTGTTCAGTCACAGCACTTCACAAACCTTACTATGTGTGTCAAACAAACTACAGAACAATTTCTGAACAACACTGTGAATGCTAATGTTAACCTCATACCAAAGCATGTCAACGATACAAAATCACTAGAACAATTTTGTAGAGATACTGTGATTACTATTTGGCATTATCATGGTGGATGTCATGTAGGGAAGGTTGTCGACTCCGATCATAAGGTTCTTGGTGTTAACAGACTTCGTGTCATAGATGGATCGACATTTACTGAGTCACCAGGAACTAATCCTCAAGCTACTGTCATGATGATGGGCAGGTACATGGGAATGAAGATTTTAAGAGATAGGTTGGGAAAATTTGCTGGTGTTTGA 1773 0.388 MASFCAVKFLLCFFIIWFINFLPLCQGKENNGYKYPFIKKASSFSSPPSISTTNTNDGYDYIIVGGGTAGCPLAATLSKNFNVLLLERGGVPFTNPNVSFLDNFHITLADTSPTSASQFFMSTDGVYNARARVLGGGSAINAGFYTRASSRFIQKMGWDAELVNKSYPWVEKQIVHRPTFSHWQRALRDGLLDAGVSPFNGFTYEHKYGTKLGGTIFDRFGRRHTAAELLASGNPNKLTVLIYATVQKIVFYTTGKRPKAMGVIFKDENGKQHKAILGNDRQNEVIVSSGAIGTPQMLLLSGIGPKAELEKLKIPVVLDNRFVGKGMVDNPMNTIFVPLKKPVKQSLIETVGITNRGVYIEASSGFGQSSDSIHCHHGMLSAEIGQLSTIPPKQRSEEAIKAFMKNKKDIPIEAFKGGFILTKVANPWSTGDLRLVNTNVDDNPAVTFNYFSHPADLQRCVEGIQLVTKVVQSQHFTNLTMCVKQTTEQFLNNTVNANVNLIPKHVNDTKSLEQFCRDTVITIWHYHGGCHVGKVVDSDHKVLGVNRLRVIDGSTFTESPGTNPQATVMMMGRYMGMKILRDRLGKFAGV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05368 590 PIRSF Alcohol_oxidase 37 588 IPR012132 GO:0050660
Tsu02g05368 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
Tsu02g05368 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Tsu02g05368 590 Gene3D - 59 572 IPR036188 -
Tsu02g05368 590 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 590 - -
Tsu02g05368 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Tsu02g05368 590 SUPERFAMILY FAD/NAD(P)-binding domain 52 582 IPR036188 -
Tsu02g05368 590 Gene3D - 176 522 - -
Tsu02g05368 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Tsu02g05368 590 PANTHER OSJNBA0019K04.7 PROTEIN 2 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05368 Tsu-Chr2 62216255 62221396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05368 3 585 Miscellaneous Gene Families AT3G56060 49.233 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05368 K15403 - gmx:100818122 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05368 02 62216255 62221396 Tsu08g00479 08 4792687 4813731 PCT