Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05367 aTGACAGATCGTGTTTACCCTGCCGCCAAACCCACCACCAACGGCAACGGTAACGGTGTCACCGCCGCCAACCCATCATTCCCAGCCACAAAAGCTCAACTCTACGGTGCTACCCGTCCTACCTACCGTCCTCAACCTCATCACCGCCGTAGCCGCCGCCGTTGCTGTTGCACTTTCTTTTTCTGGCTTCTATTAATCATCCTCATCCTCCTCCTCATCGTCGGCATCATCGGCACCGCTTTCTACCTAATCTACCGTCCTCACCGTCCTTCTTTCACCGTCACATCTCTCAAACTTTCATATCTGAATCTCACTTCTTCTTCAACTCTCAACTCAAAATTCAACGTCAACATCACAGCAAAAAACCCAAACAAAGACATAATCTTTGTTTACCAACCAACAACCATTTCAATTCTCTCCGGCGAAATCGACATCGGCGACGGAACAATACCATCTTTCAACCATGGGAAAAAGAACACTACTCTTTTAAAAGCTTCGATTTTGAGCACCAGAGAAGCACTAGAAAGTGACGCTGCTTCAGAGCTGAAGAAGAATATGAAGAGCAAAAATGGGTTACCGTTGAAAGTGAAATTGGATACGAAAGTGAAAGCGAAAATGGGAAAATTGAAAACACCTAATGTTGGAATTAGAGTTTCTTGCGACGGAATTAAAGTTCATTTACCCGTCGGTAAAAAACCAGCGACGGCGTCAACTTCTAACGTTAAGTGTAACGTTGATGTGAGGTTTAAGATCTGGAAATGGACTGTTTAA 771 0.4475 MTDRVYPAAKPTTNGNGNGVTAANPSFPATKAQLYGATRPTYRPQPHHRRSRRRCCCTFFFWLLLIILILLLIVGIIGTAFYLIYRPHRPSFTVTSLKLSYLNLTSSSTLNSKFNVNITAKNPNKDIIFVYQPTTISILSGEIDIGDGTIPSFNHGKKNTTLLKASILSTREALESDAASELKKNMKSKNGLPLKVKLDTKVKAKMGKLKTPNVGIRVSCDGIKVHLPVGKKPATASTSNVKCNVDVRFKIWKWTV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05367 256 Pfam Late embryogenesis abundant protein 118 220 IPR004864 -
Tsu02g05367 256 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 7 255 - -
Tsu02g05367 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 255 - -
Tsu02g05367 256 MobiDBLite consensus disorder prediction 7 23 - -
Tsu02g05367 256 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05367 Tsu-Chr2 62210331 62211588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05367 48 244 EF-hand Containing Proteins AT5G21130 24.747 8.28e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05367 - - mtr:MTR_2g100060 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05367 02 62210331 62211588 Tsu08g00481 08 4855354 4856197 PCT