Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05314 ATGGCGAATCTTGTTCCTGGGGTACTTTTGAAGCTATTACAACATATGAATACAGATGTTAAGGTTGGTGGTGAACACAGATCATCACTTTTACAAGTTGTTAGCATTGTTCCAGCTCTTGCAGGTGGTGAACTTTTCCCAAATCAAGGTTTTTATCTTAAAGTTTCAGATTCATCTCATGCTACTTATGTTTCTTTACCTGATGAACATGATGATTTGATTTTAAGTGATAAAATTCAATTGggtcaatttgtttttgttgatcgTTTTGAAGCTTCTTCACCTGTTCCTTTAATTCGTGGTGTTAAGATTGTTCCTGGTAGACATCCTTGTGTTGGTACACCTGAAGATATTGTTGCTACACATTCACTTTCATTtcttgataataataataataatgatgatgttgttaaTAAGAATAACAAAAGTAGAGACAAGAATAATGTTGTTTGTTCTGAGAATCCTAGGAATGTGTTTGGTTTGACTATGAAGgataaggagaaaaaagagagaatgaGATTAAGTTTAGGTGGTTATAGTTTTAAGGAGGAATCATCAGAGAAGAAAAATGGGATTTTTGGAAGAGTTGGTAGTAAAAATGAGTCTGAGAAAAGAAAACCAGTGTTGAAGATTGATGTCAAGAAGGAATCGTCGTTACCTCAATCATTGACAAGATTGAGGTCGACGAATTCGAGGCCGACGAATTCAAAGTCGATTCCTTCTTCACCTAGTAGTGTTTATTCATTGCCTaattcttttgagaaatttgcTAATGGTGTTAAGCAGCAAAGGGCAAAGGTTAGTGGTAAGGCTGTGGAGAAGGTTGAGGTGGGAAAGGCtggtaaaaaaattgttatgggAAATCCTATTAGGAATTTGGTGCAAGGGTTTGATTTTGGGGCTAAGGCTTTAAGAAAAAGTTGGGAAGGGAGTATGGAGGTTAAGACTACTAAAGAGTCTTCCAAAATCAAGGGTGCTGCTTCCAAGCCAGAAATTCATAGCTCGACTCCTAGGAGAAGCAGCATTTCAAACGAAAAGTTGCTGTCTAGAGAGGTTAAAGCACCAATAAAGCCCTCTAAGGAAGAACATAAGGCTCAAGTGTCTATAAAGAAGGTTACTACAGAGGAACAAGAGAAGTTAAACAGAAGAACTTCCATTGGAGGAAAGAAATCGGCGGAAGTTTCTAACAACGCGCTACCTGGAAACATGGTCAAAGTTTCTCTAAGTAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGAAAGGAAGTAATGAAGCACAGAGATTCTGCACAGCTGGCAGCAATTGAGGCTATGCAAGAAGCCGCTGCAGCCGAGAGTTTATTACAATGTCTGAGTATGTATTCGGAGCTGACTAATTCTGCAAAGGAACATAACCCACAGCCAACAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTGAATAGTACCCGAACAATTGCCGAATCCTTATTTAAACCCATTTCAGATGTTTCGTCTCCAGATCATGAAAAGAGCAAAGTGGAAGAAGcacaaaaactaaaatcagATAGACAAAAACATGCGGCTTCTTGGGTCCATGCAGCCCTAGCCACCAACCTGTCATCTTTCGCTGTTTTTACAAAAGAATCTCAACCATCTAAGCTTCCAGCTTCAAGTAATAATTCTCAAAATCAAAAGACTGCCATTGGAAATCAACCAGCATTAGTCCTACACAATTCAAGCGAAGATTCATCGTCAAAAGCTCGTGCAAAACCTCGTCCCATAGTTAATTCCAAGCTTGTCTCTCAAGGCATCCTTCCTCGCAAATCGACTGACGGTTCATCAAATGGGCAAAAGCAACCGGTCCAACCACCCCCGGAATGGATAAAAGGAAATGGTCTTGACGAGGTGGTTGATTTGGCTGAAATGTTGCAGTTACAGTCCCGGGACTGGTTTTTGGGATTTGTTGAAAGATTCTTGGACAGTGATGGGGACACTACCTTGTCAGATAATGGTCAAATAGCTGGTATGCTCACTCAACTAAAGAGCGTAAATGATTGGTTAGATGAGATAGGGTTGAACAAGGACGACGAAGAATCGTGCCAGATATCGGCAGAGACCATTGACCGGTTGAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTTAGTGGCGGATCACAATCACAAGCATTGCCTCAGATCCAAACAACACAGATTAAAGCCAAAAGCGTGTCTGTGAGTGTTGTAAACTCCAAAGTTTTATCCTACTTCCAATTTACCATAATTTCTGAGGCCTGGACTGCACGTCGAGCTATTATGTTCAGACAAAATTTTGCCAACAATAACTTATTGGCGAACAAAGTTAAGGATCTTCAATGTGAGATGCTCACCGGCCAGCGCATACGCGTTGATTAA 2451 0.3847 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRFEASSPVPLIRGVKIVPGRHPCVGTPEDIVATHSLSFLDNNNNNDDVVNKNNKSRDKNNVVCSENPRNVFGLTMKDKEKKERMRLSLGGYSFKEESSEKKNGIFGRVGSKNESEKRKPVLKIDVKKESSLPQSLTRLRSTNSRPTNSKSIPSSPSSVYSLPNSFEKFANGVKQQRAKVSGKAVEKVEVGKAGKKIVMGNPIRNLVQGFDFGAKALRKSWEGSMEVKTTKESSKIKGAASKPEIHSSTPRRSSISNEKLLSREVKAPIKPSKEEHKAQVSIKKVTTEEQEKLNRRTSIGGKKSAEVSNNALPGNMVKVSLSSRKVTDASVQWASLPSSISKLGKEVMKHRDSAQLAAIEAMQEAAAAESLLQCLSMYSELTNSAKEHNPQPTVEQFLTLHASLNSTRTIAESLFKPISDVSSPDHEKSKVEEAQKLKSDRQKHAASWVHAALATNLSSFAVFTKESQPSKLPASSNNSQNQKTAIGNQPALVLHNSSEDSSSKARAKPRPIVNSKLVSQGILPRKSTDGSSNGQKQPVQPPPEWIKGNGLDEVVDLAEMLQLQSRDWFLGFVERFLDSDGDTTLSDNGQIAGMLTQLKSVNDWLDEIGLNKDDEESCQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQSQALPQIQTTQIKAKSVSVSVVNSKVLSYFQFTIISEAWTARRAIMFRQNFANNNLLANKVKDLQCEMLTGQRIRVD 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05314 816 MobiDBLite consensus disorder prediction 575 633 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 508 525 - -
Tsu02g05314 816 PANTHER EXPRESSED PROTEIN 1 754 IPR010341 -
Tsu02g05314 816 PANTHER DUF936 FAMILY PROTEIN 1 754 - -
Tsu02g05314 816 Pfam Plant protein of unknown function (DUF936) 4 734 IPR010341 -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 315 345 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 214 246 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 506 525 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 217 246 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 607 626 - -
Tsu02g05314 816 MobiDBLite consensus disorder prediction 374 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05314 Tsu-Chr2 61805995 61811591 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05314 - - cam:101502274 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05314 02 61805995 61811591 Tsu02g05314 02 61805995 61811591 ECH
Tsu02g05314 02 61805995 61811591 Tsu02g02272 02 22921108 22924476 PCT