Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02272 ATGGCAAATCTAGTTCCTGGGGTGCTTTTAAAGTTAATGCAGCATATGAACACAGACATAAAAGTTGGTGGTGAACATAGATCATCATTGTTACAAGTTGTTAGTATTGTTCCAGCATTATCAGGTGGAGATTTGTTTACAAATCAAGGCTTTTATGTTAAGGTTTCTGATTCATCACATGCTACTTATGTTTCTCTTCCTGATGAACATGATGATCTAATTCTTAGTGATAAGATTCAGTTAGGAcagtttatttttgttgatcgGTTAGAAGCTGCTTCGCCTGTTCCGATTATTCGTGGTGTTAGGCCTGTTCCTGGTAGACATGCTTGTGTTGGAACACCTGAAGATATTGTTGCAACTAATTCACTTGGTTTTCTTAGCAATGTTTCTGATGTTAAGGTTAAGGTTAAGCAGAATGGTGTTAGTTCGAAGTCTCCGATGAAAGTGTTGGAGAATCATCAAGAACAATTGGATAAGAAATCATTGGTTTTTGGTAGAAGTAAATCTCAAACGACGAAAGATTCTTCCGTTGTTGATTTTGTTAAGAGGGAAAAGTTAACAAGATTGAAGTCATTGAATTCAAGGAGTATTGTTCCTTCTTCACCTACTAGTTGCTATTCTTTGTCAccttcttttgagaaattttctaatagTGTTAAGCAACAAGGAAATATCCATGTAGTGGATAAGCTAATATCTAAGGTGGGAGTGGTGGAGACAGGAAAAGGTGTTCGCGGCGTTAGTCCTCTCGGGAAGAGAATTGCAGTTGGAAATTCAATCAGAAATTTGGTTCAAGGAATTGAGCTTGGTGCTAAAGCGTTGCGGAAAAGCTGGGAAGGGAACATGGAAGTTAAGAATAATAAAGATACATCCAAATTAAGGGCTTCTTCTAAGTGTGATCTTAAGCCTGAATTTCGTAGCACAACTCCTAGGAAAAGTACATCAAGTGAGAAGTTTCCATCTAGAGATTATGAGAGTAAGACACAAGCATCAACCAAGTTGTCTTCTAAGGAAGAGAACAAGATTCAAAAATCTATAAAGAAAGTTATTGGTGATGGAATTATGGAAGAACAAGAGAAGTCAAGTAAGCCAAGAAATTCCTTCGGAAAGAAGTCATCAGAAGCCGGACTTCCTGGGAACTTGGTCAAGGTTTCGATAAATAGTAAAAAAGTGACAGATGCAAGTATTCAATGGACTTCACTTCCTTCATCCATTGCAAAACTTGGCAGGGAAGTAATGAAGCATAGAGATGCAGCACAGATGGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCTGATAGTTTGCTGCAATGTCTTAGTGTATATGCAGAACTAAGTAATTCTGCTAAGGAACATAACCCTCAGCTTACAATTGATCAATTTTTAACTCTTCACACGAGTTTGAATAGTGCGCGGATGATCACAGACTCCCTTTCTAAAACCATTTCAGATGGTTCATCTCAAGATAATGAAAGAATCACAACAGAAGAAGAACTAAAACTCAAATCAGATAGACAAAAGCTTGCAGCTTCTTGGGTCCAAGCTGCATTATCCACTAATCTATCATCCTTTTCTGTTTATAACCGAGAACCTCTATCATCGAAGCTTCCGGTTTCAACTACAAGTAACTCTCAAAACCAAAAGAATGTTCTCGGAAGTAAACCGATATTAGTCCTAGAAAATTCAAGAGAAGACGCTTCATCGAAATCTCACGGAAAAACCCGTCAGGGAGCTGCTAATTCCAAACAAACGTTACAAGGAACTCCACGAAAACAAGGTGATGCATTATCAAATGGGAAAAAGCAACTAGTCCAACCTCTTCCAGATTGGATTAGAGGAAACGGCGTTGATGAGGCGGTGAATTTGGCTGAGATGCTGCAATTGCGATCACGAGATtggtttttgttgtttattgagaaattCCTAGACAGCGACGGAGACACTGGTTTGTCAAACAATGGTCAAATAGCAGGAATGCTCACTCAACTAAAAAGCGTAAACGATTGGTTGGACAAGATAGGGTCAAGCAAGAATGAGAGCGAGTCGTGCCAGATACCGGTAGAAACAATTGAGAGACTCAGGaagaaaatatatgaatatCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTTACTTGTGACTCACAATCATCAGAGATTAAAGGCAAAAAGTGA 2184 0.3796 MANLVPGVLLKLMQHMNTDIKVGGEHRSSLLQVVSIVPALSGGDLFTNQGFYVKVSDSSHATYVSLPDEHDDLILSDKIQLGQFIFVDRLEAASPVPIIRGVRPVPGRHACVGTPEDIVATNSLGFLSNVSDVKVKVKQNGVSSKSPMKVLENHQEQLDKKSLVFGRSKSQTTKDSSVVDFVKREKLTRLKSLNSRSIVPSSPTSCYSLSPSFEKFSNSVKQQGNIHVVDKLISKVGVVETGKGVRGVSPLGKRIAVGNSIRNLVQGIELGAKALRKSWEGNMEVKNNKDTSKLRASSKCDLKPEFRSTTPRKSTSSEKFPSRDYESKTQASTKLSSKEENKIQKSIKKVIGDGIMEEQEKSSKPRNSFGKKSSEAGLPGNLVKVSINSKKVTDASIQWTSLPSSIAKLGREVMKHRDAAQMAATEAMQEAAAADSLLQCLSVYAELSNSAKEHNPQLTIDQFLTLHTSLNSARMITDSLSKTISDGSSQDNERITTEEELKLKSDRQKLAASWVQAALSTNLSSFSVYNREPLSSKLPVSTTSNSQNQKNVLGSKPILVLENSREDASSKSHGKTRQGAANSKQTLQGTPRKQGDALSNGKKQLVQPLPDWIRGNGVDEAVNLAEMLQLRSRDWFLLFIEKFLDSDGDTGLSNNGQIAGMLTQLKSVNDWLDKIGSSKNESESCQIPVETIERLRKKIYEYLLTHVESAAAALTCDSQSSEIKGKK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02272 727 MobiDBLite consensus disorder prediction 536 601 - -
Tsu02g02272 727 MobiDBLite consensus disorder prediction 286 375 - -
Tsu02g02272 727 Pfam Plant protein of unknown function (DUF936) 4 714 IPR010341 -
Tsu02g02272 727 PANTHER DUF936 FAMILY PROTEIN 1 722 - -
Tsu02g02272 727 MobiDBLite consensus disorder prediction 286 308 - -
Tsu02g02272 727 MobiDBLite consensus disorder prediction 333 368 - -
Tsu02g02272 727 MobiDBLite consensus disorder prediction 574 601 - -
Tsu02g02272 727 PANTHER EXPRESSED PROTEIN 1 722 IPR010341 -
Tsu02g02272 727 MobiDBLite consensus disorder prediction 536 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02272 Tsu-Chr2 22921108 22924476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02272 - - cam:101502171 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05314 02 61805995 61811591 Tsu02g02272 02 22921108 22924476 PCT