Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05262 ATGAGTGGAGTTAGATTTTCCCACGGTATAACCGTCGTAATAATACTAATACTATCACTTACCACCACCACCGTCAACTCATGTCCACCGTCAGACAGGGCGGCGCTACTAGCATTCAAAGCAGCTCTCAACGAATCACATCTCGGCGTCTTCACCTCATGGAAGGGAGCAGATTGTTGCCACAATTGGTACGGTGTTAGCTGCGACAAAGAATCTCGCCGCGTCGCCGATATAAACCTCCGCGGCGAATCAGAAGATCCAATCTTCCAAAGAAAACACCGTACCGGTTACATGACCGGTTACATCTCACCGTCAATTTGTAAACTAACTCGTCTTCAAAGCTTTACCGTCGCCGATTGGAAAGGTATCTCCGGCGAAATTCCTCGCTGTATATCCTCTATTCCTTTTCTTCGCATAATCGATTTAATCGGTAACCGACTCTCCGGTAATATTCCCACCGACATCGGTAGACTTCAACGTCTAACCGTTTTCAACATCGCCGATAATTTTATCTCCGGTAACATTCCACCGTCGCTAACAAATCTAAGAAGTTTAATGCATCTTGATATCCGTAATAATCGGATCTCAGGTCCTTTACCTAATGACTTCGGTAGATTACCGATGCTGAGTCGAGCTTTACTGAGCGGTAATAAAATTACCGGTCATATACCCGACTCAGTATCTCGCATTTACCGTCTAGCAGATCTAGATCTATCAAGAAACCAAGTTTCCGGACCCATACCCGAATCATTAGGAATAAGTGATTTAAATTTAAGCCGAAATGCTTTGGAAGGTAATATACCTGATGTGTTTGGTGTGAGATCTTATTTTACGGTTTTGGATTTATCTTATAACCGACTTAAAGGTCCTATTCCAAAATCAATGGCTTCTGCTTCTTATATTGGACATTTGGATTTAAGTTATAATCATTTGTGTGGTAAGATACCTGTTGGAGATCCTTTTGATCATTTGGAGGCTTCATCTTTTGTCTACAATGATTGTCTTTGTGGGAAGCCACTTAAAGCTTGTGGTTATTAA 1038 0.421 MSGVRFSHGITVVIILILSLTTTTVNSCPPSDRAALLAFKAALNESHLGVFTSWKGADCCHNWYGVSCDKESRRVADINLRGESEDPIFQRKHRTGYMTGYISPSICKLTRLQSFTVADWKGISGEIPRCISSIPFLRIIDLIGNRLSGNIPTDIGRLQRLTVFNIADNFISGNIPPSLTNLRSLMHLDIRNNRISGPLPNDFGRLPMLSRALLSGNKITGHIPDSVSRIYRLADLDLSRNQVSGPIPESLGISDLNLSRNALEGNIPDVFGVRSYFTVLDLSYNRLKGPIPKSMASASYIGHLDLSYNHLCGKIPVGDPFDHLEASSFVYNDCLCGKPLKACGY 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05262 345 Gene3D Ribonuclease Inhibitor 95 345 IPR032675 -
Tsu02g05262 345 Gene3D Ribonuclease Inhibitor 25 94 IPR032675 -
Tsu02g05262 345 SUPERFAMILY L domain-like 27 341 - -
Tsu02g05262 345 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Tsu02g05262 345 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Tsu02g05262 345 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 10 252 - -
Tsu02g05262 345 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 252 343 - -
Tsu02g05262 345 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 252 - -
Tsu02g05262 345 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 252 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05262 Tsu-Chr2 61445836 61446954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05262 123 343 Receptor kinase-like Gene Family AT5G46330 38.793 6.31e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05262 - - gmx:100804739 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05262 02 61445836 61446954 Tsu02g02193 02 21649105 21650511 PCT