Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02193 ATGTCAATACTAGTAGTTTCCTTAGAACTTCTTAGTGTCTCACCCGTTGAGTCATGCCCTCCTTCTGAATGGGCAGCATTGATGTCTTTCAAAGCAGCTCTCAATGAACCTTACTTTGGAATCTTCCGTTCATGGAGAGGCACCAATTGTTGCTACAATTGGTATGGTATCAGTTGTGACCCGACCACACATGGAATCGCAGAGATCACCCTCGACGGTCTCACCGTGGGGGACAACCACCAAAGCTATAGGCGAACAAAAAACATGGAAAGTGGATACATGACTGGACACATCTCCCCATCAATTTGCAACTTCACACAACTCTCTAGCATTACCATCTCCGATTGGAAGGGTATTTCGGGAAATATCCCTGAATGCATCACAACCCTCAATTTTCTCCAAATCATAGATTTCTCTGGAAACTATATTTCCGGAAAGATTCCGTATGAAATAGGGCGCCTCACCCAACTTAAAATGCTCAACCTTGCAGACAATCATATCTCTGGAAAAATTCCAACTAGTCTTATAAACCTCTTTAATTTAATGCAACTTGACCTTCGTAACAACGCTTTGGAGGGCCCCATTCCTGGAAACATCGGAAAACTAAAAAAGTTGAACCGAGCATTACTAAGTCACAATCGGATAAACGGTCGAATTCCGCGgtctttttcaaatatttacggGCTAGCAGACTTGGATTTATCGTTGAACATGTTATCCGGTCCAATTCCGTTTTCCTTGGGGCAAATGTCAGTTCTGGACTCACTGAACCTGAAGTATAACAACTTGACAGGGAGGATCCCGAAGACTTTGTTGGCATCAAGAATGAGCCATTTGGATTTGAGTAGAAATGCTTTGAGGGGACCTATACCGGATGTGTTTACTGAAACCTCATATTTCATAAACCTTGATTTATCACGAAATCATTTGAATGGTTTGATTCCTAAGTCCATGGCATTAGCCTTGTATATTGGACATGCGGACTTTAGTCACAACCATCTCTTCGGGAGGATTCCGGCTGTTCCTTCCTTTAGCCACCTTCAACAAGCATCGTTCGAACACAATCAACGCCTTTGCGGAAAGCCACTTAAACCATGCACCGATGGTCACATACacaaacatgaataa 1128 0.4202 MSILVVSLELLSVSPVESCPPSEWAALMSFKAALNEPYFGIFRSWRGTNCCYNWYGISCDPTTHGIAEITLDGLTVGDNHQSYRRTKNMESGYMTGHISPSICNFTQLSSITISDWKGISGNIPECITTLNFLQIIDFSGNYISGKIPYEIGRLTQLKMLNLADNHISGKIPTSLINLFNLMQLDLRNNALEGPIPGNIGKLKKLNRALLSHNRINGRIPRSFSNIYGLADLDLSLNMLSGPIPFSLGQMSVLDSLNLKYNNLTGRIPKTLLASRMSHLDLSRNALRGPIPDVFTETSYFINLDLSRNHLNGLIPKSMALALYIGHADFSHNHLFGRIPAVPSFSHLQQASFEHNQRLCGKPLKPCTDGHIHKHE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02193 375 Gene3D Ribonuclease Inhibitor 276 366 IPR032675 -
Tsu02g02193 375 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Tsu02g02193 375 Pfam Leucine Rich Repeat 201 225 IPR001611 GO:0005515
Tsu02g02193 375 Gene3D Ribonuclease Inhibitor 21 188 IPR032675 -
Tsu02g02193 375 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 375 - -
Tsu02g02193 375 SUPERFAMILY L domain-like 18 366 - -
Tsu02g02193 375 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 375 IPR045273 -
Tsu02g02193 375 Gene3D Ribonuclease Inhibitor 189 270 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02193 Tsu-Chr2 21649105 21650511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02193 89 374 Receptor kinase-like Gene Family AT5G46330 34.589 4.66e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02193 - - lja:Lj3g3v3246320.1 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05262 02 61445836 61446954 Tsu02g02193 02 21649105 21650511 PCT