Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05213 ATGGAAAACGGAGATCAGTTCCAGGAATCAAAGGCCAAATATAATTGTCTTTTATTTGATCTTGATGATACACTTTATCCTTTCAGTTCTGGATTATCAGGGCACGTCACCAAAAATATTCAAGAGTATATGCTTGAAAAGCTTGGGATACAAGAGGATAAAGTTCCTCAATTGTGTGTTTCTTTATATAAGATTTATGGGACAACCATGGCTGGTCTCAAAGCAATTGGCTATGATTTTGACTATGATGACTTTCATAGCTTTGTTCATGGGAGATTGCCATATAATTTGCTAAAACCTGACCCTGTTCTTAGGGGAATTTTGCTTAGCCTACCCTTTAGAAAAATTGTTTTTACAAACTCAGACGAGGCACATGCAAATAGAGTGCTTCACAGGCTTGGACTAGAGGATTGTTTCGAAAGAATCATAAGCTTTGAGACACTAAATTCCTCCAAATCCAATAACATCAATTCACCTCACAATAAAGATGACAATGAATATGAACAAAATTCAACGggaatatttgatttttatgagtACATTTGTAGGCCTAATGCTGATATTGTGCTTCCAAAGACCCCAGTTGTTTGTAAACCCTTTGCAGATTCATTTGAAAAGGTTTTCAAGATGGCAGATATTGACCCTCAAAGAACATTGTTCTTTGATGACAGTATCCGCAATATAAAGACAGGCAAATCTTTAGGCCTTCACACAGTCTTGGTGGGTACTTCCATTAGGACTACAGGAGTGGATCATGCCTTGGAGAGTATCCATAATATGAGAGAAGCATTTCCAGAACTGTGGGAAGCTGATGAGAAGAGTGAAAGTGACAAGTATTCTAGAAAGGTTGCAATTGAAACATCTGTTATAGCTTAA 876 0.3653 MENGDQFQESKAKYNCLLFDLDDTLYPFSSGLSGHVTKNIQEYMLEKLGIQEDKVPQLCVSLYKIYGTTMAGLKAIGYDFDYDDFHSFVHGRLPYNLLKPDPVLRGILLSLPFRKIVFTNSDEAHANRVLHRLGLEDCFERIISFETLNSSKSNNINSPHNKDDNEYEQNSTGIFDFYEYICRPNADIVLPKTPVVCKPFADSFEKVFKMADIDPQRTLFFDDSIRNIKTGKSLGLHTVLVGTSIRTTGVDHALESIHNMREAFPELWEADEKSESDKYSRKVAIETSVIA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05213 291 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 291 - -
Tsu02g05213 291 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 193 241 IPR006439 -
Tsu02g05213 291 Gene3D - 78 268 IPR023214 -
Tsu02g05213 291 SFLD C1.5.3: 5'-Nucleotidase Like 9 272 IPR010237 -
Tsu02g05213 291 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 9 272 - -
Tsu02g05213 291 SUPERFAMILY HAD-like 16 244 IPR036412 -
Tsu02g05213 291 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 241 IPR010237 -
Tsu02g05213 291 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05213 Tsu-Chr2 61068037 61070848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05213 K07025 - gmx:100790444 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05213 02 61068037 61070848 Tsu02g05213 02 61068037 61070848 ECH
Tsu02g05213 02 61068037 61070848 Tsu02g02116 02 20768575 20771623 PCT