Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02116 ATGGCAGAGTATATGCTTCAAAAGCTCGGAATGGAGGCTGCTAAAGTTCCTGAGTTGTGCCATACCTTATACAAGACTTATGGAACAACAATGGCTGGTCTAAGGGCAATCGGCTATGACTTTGATTACAGTGACTTTCATAGTTCTGTTCATGGGAGATTGCCATATAATCTACTGAAACCAGACCCTGTTCTCAAGGGCATCTTGCAAAGCCTTCCTTTTAGGAAAGTGCTTTTTACTAATGCAGACACAGGACATGCAATTAGAGTGCTTCAAAGGCTTGGACTGGAGGACTGTTTTGAAAGAATTATAAGCTTTGATACTCTGAATCCCTTTGACAAAACCAATCCTTCTAATGACAAAGATGGCTGTGAAATTTTTGATTTCTGTGAGTACACACGCCGGCCTGATTCTGATATGGTGCTTCCAAAGACACCAGTTATCTGCAAACCCTTTGATGATGCATTTGAAAAGGCTTTCAAGTTGGCAGACATTGACCCTCAAAGAACATTGTTCTTCGATGACAGTGTCCGCAATTTACAGACGGCTAAGCGTTTGGGCCTCCATACAGTTGTGGTGGGAACATCTGTGCGCAGCACCGGAGTGGATCATGCATTAGAGAGTATCCATAATATCAGAGAGGCCTTTCCAGAGCTATGGGAAGCCGATGAGAAGCATGAGATTGTCAACTACAAGGTTGCAATTGAAACAACAGTAAAAGCATAA 726 0.427 MAEYMLQKLGMEAAKVPELCHTLYKTYGTTMAGLRAIGYDFDYSDFHSSVHGRLPYNLLKPDPVLKGILQSLPFRKVLFTNADTGHAIRVLQRLGLEDCFERIISFDTLNPFDKTNPSNDKDGCEIFDFCEYTRRPDSDMVLPKTPVICKPFDDAFEKAFKLADIDPQRTLFFDDSVRNLQTAKRLGLHTVVVGTSVRSTGVDHALESIHNIREAFPELWEADEKHEIVNYKVAIETTVKA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02116 241 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 2 241 - -
Tsu02g02116 241 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 1 193 IPR010237 -
Tsu02g02116 241 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 146 193 IPR006439 -
Tsu02g02116 241 SUPERFAMILY HAD-like 17 197 IPR036412 -
Tsu02g02116 241 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 2 241 - -
Tsu02g02116 241 Gene3D - 41 220 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02116 Tsu-Chr2 20768575 20771623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02116 K07025 - gmx:100807717 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02116 02 20768575 20771623 Tsu02g02116 02 20768575 20771623 ECH
Tsu02g05213 02 61068037 61070848 Tsu02g02116 02 20768575 20771623 PCT