Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05149 ATGCACTTGTGTTACCTGATCTGGAAAGTGTATGATCAGAGAAGGGACCAACAGTGTTACATATTAAACTATCAATGTTACAAACCAAGTGATGAAAGAAAGCTTGGAAGTGAACGTTGTGGAAAGATCATAGGAAACAATGATGATATTGGTTTGAATGAGTGCAAGTTCTTCCTTAAAGCTATTGTCAACTCAGGCATTGGTGAGGAAACTTATGCTCCAAGAAACTTCATCGAAGGCAGAGCCACGAACCCAACATTGCAAGACGGAATCGAAGAGATGGAAGAGCTTTGTCATGACAGCATTGCAAAACTTCTAAAGAAATCATGCATTTCACCTTCGGAGATCGATGTTCTTGTGGTAAATGTATCTTTGTTTTCTGCTATACCTTCTTTAACTTCTAGAATCATTAACCATTACAAAATGAGAGAAGACATAAAAGCTTATAACCTAGCTGGTATGGGTTGTAGTGCTAGTCTTATTTCATTAGACATTATTCAAAACATTTTCAAGTCACAAAAGAACAAGTATGCTCTTTTGTTGACATCAGAATCTTTGAGTCCAAATTGGTATTCAGGCAACAACAGGTCAATGATTCTTGCAAATTGTCTTTTTCGCATTGGCGGATGCGCAATTCTTCTCACAAATAAAAGATCCTTAAAGCATAAAGCTATACTAAAACTAAACCATTTAGTTAGGACTCATCACGGCGCCAGAGATGACGCGCATAACTGTTGTAGTCAAAAGGAAGACGAACAAGGTAAACTCGGTTTTTTCCTAGCTAAAGATCTTCCAAAAGCCGCTACAAGAGCTTTCGTCGATAATTTAAGAGTATTATCGCCTAAAATTTTACCGGCAAGGGAATTACTTAGGTTTCTTATCATGTCAGTcataaaaaaagttacaaaatttCATGTCCCTAAGTCAGCTGCAGGTGGTATTGGTGGTGGAACAAGTAACAAATCACCATTGAATTTCAAAACCGGCGTTGATCATTTCTGTCTTCACACCGGAGGAAAAGCAGTAATCGATGGAATAGGTATGAGTTTAGATCTAAATGAATATGATCTTGAGCCAGCAAGAATGTCCCTTCATAGATTTGGTAACACATCAGCAAGTAGTTTATGGTATGTGTTAGGATATATGGAAGCTAAGAAAAGGTTGAAGAAAGGTGAAAAAGTATTAATGATAAGTTTAGGTGCTGGCTTTAAATGCAATAGTTGTTTGTGGGAAGTAATGAGAGATGCTGATGATAGAAATGTGTGGGACGATTGCATTGATTACTATCCACCACACTCCTTAGCCAACCCATTCATGGAGAAGTACGGTTGGATTAACAATATTGAAGATCCAAGCACTTTCAAACATAAGCTTGCTCAGTTTCTTCAAAACTGA 1395 0.372 MHLCYLIWKVYDQRRDQQCYILNYQCYKPSDERKLGSERCGKIIGNNDDIGLNECKFFLKAIVNSGIGEETYAPRNFIEGRATNPTLQDGIEEMEELCHDSIAKLLKKSCISPSEIDVLVVNVSLFSAIPSLTSRIINHYKMREDIKAYNLAGMGCSASLISLDIIQNIFKSQKNKYALLLTSESLSPNWYSGNNRSMILANCLFRIGGCAILLTNKRSLKHKAILKLNHLVRTHHGARDDAHNCCSQKEDEQGKLGFFLAKDLPKAATRAFVDNLRVLSPKILPARELLRFLIMSVIKKVTKFHVPKSAAGGIGGGTSNKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLNEYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGEKVLMISLGAGFKCNSCLWEVMRDADDRNVWDDCIDYYPPHSLANPFMEKYGWINNIEDPSTFKHKLAQFLQN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05149 464 Pfam FAE1/Type III polyketide synthase-like protein 12 300 IPR013601 GO:0006633|GO:0016020|GO:0016747
Tsu02g05149 464 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 444 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tsu02g05149 464 SUPERFAMILY Thiolase-like 5 219 IPR016039 GO:0016746
Tsu02g05149 464 PANTHER 3-KETOACYL-COA SYNTHASE 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tsu02g05149 464 PANTHER 3-KETOACYL-COA SYNTHASE 2 451 - -
Tsu02g05149 464 CDD CHS_like 7 410 - -
Tsu02g05149 464 Gene3D - 42 412 IPR016039 GO:0016746
Tsu02g05149 464 SUPERFAMILY Thiolase-like 229 413 IPR016039 GO:0016746
Tsu02g05149 464 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 330 411 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05149 Tsu-Chr2 60547851 60549312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05149 7 455 Acyl Lipid Metabolism Gene Families AT2G28630 66.446 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05149 K15397 - gmx:100776947 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05149 02 60547851 60549312 Tsu02g05149 02 60547851 60549312 ECH
Tsu02g05149 02 60547851 60549312 Tsu02g03491 02 39100254 39101534 ECH
Tsu02g05149 02 60547851 60549312 Tsu02g03491 02 39100254 39101534 PCT