Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05132 ATGGTTCTTCTCATTTCTCTTTTACTCTCATTCATGATTTGTAATAGTAATGCTCAAGGTTTACCTTCACCAGGGTACTACCTTAGTTCCAAAGTAAGCACTATTAGCTTTGATCAAGGATTTAGTAACCTTTGGGGACCTCAGCATGAAAAACTAGACCAAGGATCATTATCAATCTGGCTTGACTCTAACTCAGGAAGTGGATTCAAGTCGCACCACTCTTATAAATCTGGATACTTTGGTGTTGCGGTTAAGCTTCAACCGGGTTATACCGCAGGAGTCATTACATCTTTCTATCTTTCAAACAATCAAGACTACCCAGGAAATCATGATGAAATAGACATTGAATTCCTTGGTACAACACAAGATAAGCCATATGTGTTGCAAACAAATGTGTACATCAAAGGAAGTGGAGATGGGAAGATTATAGGAAGAGAGATGAAATTTCATCTTTGGTTTGATCCAACACAAGATTTTCACAACTATGCCATCCTTTGGAAACCCAGTGAGATCATTTTTTTAGTGGATGATGTTCCAATAAGAAGGTATCCTAGGAAGAGTGATTCAACATTCCCTTCAAGACCAATGTATGTGTATGGATCAATATGGGATGCATCTCCATGGGCTACAGAAAATGGAAAATACAAAGCAGATTATAATTATCAACCTTTCATTGGTAAATACAAAAACTTCAAATTACAAGGTTGTACCACTGATTCCACCTCCTCCTCCTGCCGGCCACCTTCTATTTCGCCTTCCGGCTATGGCGGCAGGCTGAGCCCTCAGCAAAATACTGCAATGCAATTGGTCCAAAATAACTACTTGGTCTATAATTATTGTCATGATCCTAGCAGAGACCATACACTTATTCCAGAATGCTGA 882 0.3912 MVLLISLLLSFMICNSNAQGLPSPGYYLSSKVSTISFDQGFSNLWGPQHEKLDQGSLSIWLDSNSGSGFKSHHSYKSGYFGVAVKLQPGYTAGVITSFYLSNNQDYPGNHDEIDIEFLGTTQDKPYVLQTNVYIKGSGDGKIIGREMKFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDSTFPSRPMYVYGSIWDASPWATENGKYKADYNYQPFIGKYKNFKLQGCTTDSTSSSCRPPSISPSGYGGRLSPQQNTAMQLVQNNYLVYNYCHDPSRDHTLIPEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05132 293 Gene3D - 17 293 - -
Tsu02g05132 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 293 IPR013320 -
Tsu02g05132 293 Pfam Glycosyl hydrolases family 16 39 220 IPR000757 GO:0004553|GO:0005975
Tsu02g05132 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 258 293 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Tsu02g05132 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 7 293 IPR044791 GO:0004553
Tsu02g05132 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 16 228 IPR000757 GO:0004553|GO:0005975
Tsu02g05132 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 7 293 - -
Tsu02g05132 293 MobiDBLite consensus disorder prediction 239 258 - -
Tsu02g05132 293 PIRSF EndGlu_transf 1 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05132 Tsu-Chr2 60382666 60384924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05132 1 293 Glycoside Hydrolase AT3G44990 62.373 7.09e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05132 K08235 - gmx:100781528 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05132 02 60382666 60384924 Tsu02g03660 02 41170710 41173693 PCT