Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03660 ATGCTCCCTACTACAATgccattatcatcatcaatattCTCTAATTTCTTCCATATAGTTCCTATATTATCTCTTCTTATACTATCACTCACAATCTTTTCTTCTAATGCTCAGGGTCCACCTTCACCTGGCTACTACCCTAATTCCAAAATTAGTCCTATTTCATTTAGTCAAGGCTTTAGAAACCTTTGGGGACCTCAACATCAAAAATTGGACCAAAACTCATTAACAATATGGCTTGACTCCAACACagGTAGTGGATTCAAGTCACTTCACTCTTATAAATCTGGATACTTTGGTGCTGATATTAAGCTTCAACCTGGCTATACTGCTGGAGTTATTACTTCTCTCTATCTTTCAAATAATCAAGATTTTCCAGGAAACCATGATGAAGTTGACATTGAGTTTCTTGGGACAACACCAGGTAAGCCATATGTGTTGCAGACAAATGTATATATCAAAGGAAGTGGAGATAGGAATGTTATAGGAAGAGAGATGCAGTTTCATCTTTGGTTTGATCCAACTCAAGATTTTCACAACTATGCTATTCTATGGAAAGCCACTGAGATAATATTTTTAGTGGATGATGTTCCTATAAGAAGGTATCCTAGGAAAAGTGATGCAACCTACCCTTCAAGACCAATGTATGTGTATGGTTCAATTTGGGATGCATCTTCTTGGGCAACAGAAGATGGTAAATACAAAGCAGATTATAGATACCAACCCTTTGTTGGAAGgtacaaaaatttcaaattacaaGGTTGTACCACACAAAGTCCTGCCTCATGTCAATCTCCCTCTGGCTCTCCATCTGGCTATAGTAGCCTTAGCCCTCAACAATATATGGCTATGCAATGGGTCCAAAATAATCATATGGTGTACAATTATTGTCATGACCCTAGAAGAGACCACAATCTTATCCCTGAGTGTTAA 933 0.3644 MLPTTMPLSSSIFSNFFHIVPILSLLILSLTIFSSNAQGPPSPGYYPNSKISPISFSQGFRNLWGPQHQKLDQNSLTIWLDSNTGSGFKSLHSYKSGYFGADIKLQPGYTAGVITSLYLSNNQDFPGNHDEVDIEFLGTTPGKPYVLQTNVYIKGSGDRNVIGREMQFHLWFDPTQDFHNYAILWKATEIIFLVDDVPIRRYPRKSDATYPSRPMYVYGSIWDASSWATEDGKYKADYRYQPFVGRYKNFKLQGCTTQSPASCQSPSGSPSGYSSLSPQQYMAMQWVQNNHMVYNYCHDPRRDHNLIPEC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03660 310 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 22 310 - -
Tsu02g03660 310 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 35 247 IPR000757 GO:0004553|GO:0005975
Tsu02g03660 310 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 22 310 IPR044791 GO:0004553
Tsu02g03660 310 Gene3D - 36 310 - -
Tsu02g03660 310 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 274 310 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Tsu02g03660 310 Pfam Glycosyl hydrolases family 16 58 239 IPR000757 GO:0004553|GO:0005975
Tsu02g03660 310 PIRSF EndGlu_transf 19 310 IPR016455 GO:0010411|GO:0016762|GO:0042546
Tsu02g03660 310 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 310 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03660 Tsu-Chr2 41170710 41173693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03660 23 310 Glycoside Hydrolase AT3G44990 66.323 8.89e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03660 K08235 - gmx:100781528 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03660 02 41170710 41173693 Tsu02g03660 02 41170710 41173693 ECH
Tsu02g05132 02 60382666 60384924 Tsu02g03660 02 41170710 41173693 PCT