Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu02g05126 | ATGTCGCAGAAGAaaaaccacaacaacaacaagaacaacaacaacaacaacaacaatgctcaaaatcaaaacgaaaacaaagaaaccaacaacaataacaacaacaagaaaGAAGATGAAACGAAGGCAACAAAAGTCGTTATGAAGATCGACATGCATTGTGAAGGATGTTCTTCCAAAATCATCAAATGCATTTCTGGTTTTGAAGGCGTGGAGAAATTAGATCAAGGAGACGGAACTGGAAAGTTAACCATCACCGGCAACATCGACGCCGCGAAACTCAGAGACAAACTTGTTAgtaaaacaaagaagaaagttGAAGTTATTTCTCCTGTTCTTAAGAACAATGacaaggaaaacaaaaaatctgataacaaaaacaacaaacctGATGACAAAAAACCCAAAGAGCTTCCGTTTACGACCGTGACTTTGAAGATGGAGCTGCATTGTCAAGGTTGCATTGAGAGAATTCACAAAACTgtgtcgaaagcaaaagGTGTTAATCATGTGACGATTGATAAGGAGAAGGAGATAGTGACTGTTAAAGGAACTATGGATGCGAAAGTTTTGGTGGAGAAATTGAAGAAGAGGTTTAAGAGAAAGGTTGAAGTGGTCCAACCCAAGAAGGACAAGGATAAGGACAAGGAGAATGAGAAAGAAGGTAACAAAGGAGAGAAATCAGAGAATGATGGTGGCAAGAAGAATAATAATCAGAAAGGTGAAGGTGGAAATAAAAAGGGTGATGGTAATAGTGGTGACAACAATGCTAAAATGGAGGTTTCAACTTCTGGATATGGTTATGGATATGGTTTTTTGGGATTTGATTATGCTTATAATAACAATGGACAAATTCAAATGATGCAGATGCAAGCACCACAAATGTTCAGCGATGAAAATCCGAATGCTTGTTCTGTTATGTGA | 924 | 0.3171 | MSQKKNHNNNKNNNNNNNNAQNQNENKETNNNNNNKKEDETKATKVVMKIDMHCEGCSSKIIKCISGFEGVEKLDQGDGTGKLTITGNIDAAKLRDKLVSKTKKKVEVISPVLKNNDKENKKSDNKNNKPDDKKPKELPFTTVTLKMELHCQGCIERIHKTVSKAKGVNHVTIDKEKEIVTVKGTMDAKVLVEKLKKRFKRKVEVVQPKKDKDKDKENEKEGNKGEKSENDGGKKNNNQKGEGGNKKGDGNSGDNNAKMEVSTSGYGYGYGFLGFDYAYNNNGQIQMMQMQAPQMFSDENPNACSVM | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu02g05126 | 307 | SUPERFAMILY | HMA, heavy metal-associated domain | 140 | 197 | IPR036163 | GO:0046872 | |
| Tsu02g05126 | 307 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Tsu02g05126 | 307 | MobiDBLite | consensus disorder prediction | 204 | 256 | - | - | |
| Tsu02g05126 | 307 | MobiDBLite | consensus disorder prediction | 109 | 138 | - | - | |
| Tsu02g05126 | 307 | CDD | HMA | 52 | 107 | IPR006121 | GO:0046872 | |
| Tsu02g05126 | 307 | CDD | HMA | 149 | 197 | IPR006121 | GO:0046872 | |
| Tsu02g05126 | 307 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 | 17 | 307 | - | - | |
| Tsu02g05126 | 307 | Gene3D | - | 42 | 114 | - | - | |
| Tsu02g05126 | 307 | Gene3D | - | 141 | 213 | - | - | |
| Tsu02g05126 | 307 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Tsu02g05126 | 307 | Pfam | Heavy-metal-associated domain | 47 | 104 | IPR006121 | GO:0046872 | |
| Tsu02g05126 | 307 | Pfam | Heavy-metal-associated domain | 148 | 198 | IPR006121 | GO:0046872 | |
| Tsu02g05126 | 307 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 | 17 | 307 | IPR044594 | GO:0046872 | |
| Tsu02g05126 | 307 | MobiDBLite | consensus disorder prediction | 204 | 242 | - | - | |
| Tsu02g05126 | 307 | Coils | Coil | 4 | 40 | - | - | |
| Tsu02g05126 | 307 | SUPERFAMILY | HMA, heavy metal-associated domain | 44 | 106 | IPR036163 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu02g05126 | Tsu-Chr2 | 60289808 | 60291216 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu02g05126 | - | - | mtr:MTR_2g095480 | 264.233 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu02g05126 | 02 | 60289808 | 60291216 | Tsu02g05126 | 02 | 60289808 | 60291216 | ECH | |
| Tsu02g05126 | 02 | 60289808 | 60291216 | Tsu02g03649 | 02 | 41047850 | 41049571 | PCT |