Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04786 ATGGATTACACCATCTCCACCGTTCTTCTCTTCTCCTTTCTCACAATTctctcatcttcatcttcatcttcttcttcaccgACGAGTCAAATCAACTCAAACTCAGTTCTAGTAGCACTTCTTGACTCACATTACACTGAACTCGCTGAACTCATTGAAAAAGCTATGCTATTACAAACACTAGAAAACACCGTTGCTACCCACAACATCACAATCTTCGCACCAAACAATGAAGCTCTTGAACGTAATCTTGATTCTGATTTCAAACAGTTTCTTCTCGAACCGGGTAATATCCATTCCCTTCAATCTCTCCTCTTGTTCCACGTCATTCCAACCCGAATTGAACCCGGGTCAACCCGACACAAAACTCTCTCCGACCACCACCTTCACCTTGAAACAAATATCACCACCGGAGAATGGACTGTTAATCAAGCCAAAATAACCAACCTGAATATCCTGACCCGACCCGACGGTGTCATTCACGGGATCCAGCGTCTTCTTATACCACGCTCCGTTGAAGACGATTTCAACAAACGTCGTAGTCTCCGTTCAATCACCGCCGTGAAACCAGAAGGAGCACCGGACGTCGATATTAGAAACCACCGATTGAAAAAATCTCCTCCGCCGGAAAAACCAGGTTCACCGCCGGTACTTCCGATCTACGACGCTATGTCACCGGGACCATCTCTGGCACCGGCGCCGGCACCGGGACCTGGTGGTCCACACCACCACTTCAACGGCGAGGCACAAGTAAAGGATTTCATCAAAACTTTACTTCATTACGGTGGTTACAACGAAATGGCTGATATTCTCGTTAACCTAACGTCGTTAGCAACTGAAATGAGCCGTTTAGTTTCAGAAGGTTATGTGTTAACGGTTTTGGCTCCAAATGATGAAGCAATGGCGAAGTTAACGACGGAGCAGTTAAGTGAACCGGGTTCACCTGAAGAGATAATGTATTACCATATTATACCTGAGTATCAAACTGAAGAGAGTATGTATAATGCTGTTAGAAGATTCGGGAAGGTTCGATATGATACATTGCGGTTGCCGCATAAGGTGGTGGCTGAGGAAGCTGATGGGTCTGTTAAATTTGGAAATGGTGATGTTTCGGGTTATTTGTTTGATCCGGATATTTATACCGATGGGAGGATCTCTGTGCAGGGGATTGATGGGGTTTTGTTTCCTATGGAGGAGGAGAAGGAGGAGGTTGTGGAGCGGACTAAACCCGTATCGAAGATGGTTCAATCCGGGAAAGTCGTTGTTAAACCTAGGAGAGGGAAACTATTGGAAACAGCTTGCTGGATGCTTGGAACATTTAGAAACCATTCTAGATTCGCCTCTTGTCAATGA 1353 0.4442 MDYTISTVLLFSFLTILSSSSSSSSSPTSQINSNSVLVALLDSHYTELAELIEKAMLLQTLENTVATHNITIFAPNNEALERNLDSDFKQFLLEPGNIHSLQSLLLFHVIPTRIEPGSTRHKTLSDHHLHLETNITTGEWTVNQAKITNLNILTRPDGVIHGIQRLLIPRSVEDDFNKRRSLRSITAVKPEGAPDVDIRNHRLKKSPPPEKPGSPPVLPIYDAMSPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAEEADGSVKFGNGDVSGYLFDPDIYTDGRISVQGIDGVLFPMEEEKEEVVERTKPVSKMVQSGKVVVKPRRGKLLETACWMLGTFRNHSRFASCQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04786 450 MobiDBLite consensus disorder prediction 194 208 - -
Tsu02g04786 450 ProSiteProfiles FAS1/BIgH3 domain profile. 32 167 IPR000782 -
Tsu02g04786 450 SUPERFAMILY FAS1 domain 230 397 IPR036378 -
Tsu02g04786 450 SUPERFAMILY FAS1 domain 34 170 IPR036378 -
Tsu02g04786 450 MobiDBLite consensus disorder prediction 186 244 - -
Tsu02g04786 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 9 450 IPR044654 -
Tsu02g04786 450 Pfam Fasciclin domain 274 365 IPR000782 -
Tsu02g04786 450 Pfam Fasciclin domain 44 169 IPR000782 -
Tsu02g04786 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 9 450 - -
Tsu02g04786 450 Gene3D FAS1 domain 36 170 IPR036378 -
Tsu02g04786 450 ProSiteProfiles FAS1/BIgH3 domain profile. 251 394 IPR000782 -
Tsu02g04786 450 SMART fasc_3 292 397 IPR000782 -
Tsu02g04786 450 SMART fasc_3 71 170 IPR000782 -
Tsu02g04786 450 Gene3D FAS1 domain 245 396 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04786 Tsu-Chr2 57023288 57026538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04786 - - gmx:100782264 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04786 02 57023288 57026538 Tsu06g01260 06 11839929 11844254 PCT