Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04700 atggaAGAAGTAGGAAGCATACTCCACTTTCTTGAGGACAAAACCATTTTGATTATTGGTGCTACTGGTTTTCTGGCCAAAATATTTTTGGAGAAGGTTTTGAGAGTTCAACCAAATGttaaaaagatttttcttcttttaagaGCCTATGATGAGGAAGTTGCAGCTAATCGCTTGCAAAATGAGATACTAGCAACGGACTTGTTTAATATGCTACGCGAAAAATTGGATACCAAGTTCAAATCCTTTATTTCTGAAAAGTTGACTGTGGTGCCTGGAGATATCACTTGTGAAGACTTAGGTTTGAAAGTTTCCAATTTAAGGGAAGATATTTCCTCTCAAACAGATGTTATTATAAATTTGGCTGCAACTACTAACTTTTATGAAAGGTATGATATAGCATTGGGTCTAAATACATTTGGAGTAAAACATGTCATGAGCTTTGCAAAACAATGTATCAAACTTAAAGTGCTTGTCCATGTATCAACCGCTTATGTATGTGGTGAAAAAAGTGGACTCATACTAGAAAGTCCTTATCACTTTGGTGATTCGTTAAATGGTGTGGTTGGATTAGATATCAATGCAGAAAAGAGATTAATAGCTGAAAAATTGGGTGAGCTACGAGATAAAGGAGCCACGGAGCAAGAAATTAAAGTGGCCATGAAGGACCTAGGAATTTCAAGggCAAATGTTTATGGATGGCCAAACACATATGTGTTTACAAAAGCACTTGGGGAGATGCTCGTGGAACAATTGAAAGGAAACTTATCTATTGTTATTTTGCGTCCTGCTATTGTCACAAGTACATTAAAAGAACCTTTTCCTGGTTGGGTTGAGGGTGTCAGaaCTATTGACAGTTTAGGTGTTGCTTATGGGAAAGGAAAACTACAATGTTTCCTTGCAGATATCAATTGTGTTGTTGATGTGATACCAGCTGACATGGTGGTCAATGCAATGCTAGTAGCTATGGTGGCTCATGCAAATCAACGTAATGATGTTGTATATCATGTTGGTTCCTCTGTTAGAAATCcatttagatacattaatttcCAGGATTATGGACTAAGATATTTCCAGGAAAAACCATGGATAAACAAAGATGGAAGAGCCGTTAAAGTTGGCAAAGTAACTATACTAACCGACATGGATAGCTTTCAAAGATACATGTTCATTCGCTACCTTCTTCCGTTAAAGgGACTGAAACTGATCAATTCAGCATTGTGCCAGTATTTTCAAGGAACATATCTTGAGCTCAACAGGAAGATCCAGGTTGTGATGCGGTTGGTGGAACTTTACCGACCTTACTTATTCTTCAATGGCATATTTGATGATATAAACCTAGAGAAGTTGCGGATGGCAGCAAGACAAAGTGGAACAGAgacaaatttattttacttcGACCCAAAGGAGATTGATTGGGAAGATTATTTTGTGAATGCTCATTTTCCTGGTATTGTCAAGTACATTTTCAAATGA 1476 0.3591 MEEVGSILHFLEDKTILIIGATGFLAKIFLEKVLRVQPNVKKIFLLLRAYDEEVAANRLQNEILATDLFNMLREKLDTKFKSFISEKLTVVPGDITCEDLGLKVSNLREDISSQTDVIINLAATTNFYERYDIALGLNTFGVKHVMSFAKQCIKLKVLVHVSTAYVCGEKSGLILESPYHFGDSLNGVVGLDINAEKRLIAEKLGELRDKGATEQEIKVAMKDLGISRANVYGWPNTYVFTKALGEMLVEQLKGNLSIVILRPAIVTSTLKEPFPGWVEGVRTIDSLGVAYGKGKLQCFLADINCVVDVIPADMVVNAMLVAMVAHANQRNDVVYHVGSSVRNPFRYINFQDYGLRYFQEKPWINKDGRAVKVGKVTILTDMDSFQRYMFIRYLLPLKGLKLINSALCQYFQGTYLELNRKIQVVMRLVELYRPYLFFNGIFDDINLEKLRMAARQSGTETNLFYFDPKEIDWEDYFVNAHFPGIVKYIFK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04700 491 Pfam Male sterility protein 392 491 IPR033640 -
Tsu02g04700 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 339 IPR036291 -
Tsu02g04700 491 PANTHER FATTY ACYL-COA REDUCTASE 3 490 - -
Tsu02g04700 491 Gene3D - 9 384 - -
Tsu02g04700 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 490 IPR026055 GO:0080019
Tsu02g04700 491 CDD FAR-N_SDR_e 14 362 - -
Tsu02g04700 491 Pfam Male sterility protein 19 319 IPR013120 -
Tsu02g04700 491 CDD FAR_C 391 490 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04700 Tsu-Chr2 56120945 56129504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04700 114 490 Acyl Lipid Metabolism Gene Families AT4G33790 60.477 1.99e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04700 K13356 - gmx:100788680 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04700 02 56120945 56129504 Tsu02g04700 02 56120945 56129504 ECH
Tsu02g04700 02 56120945 56129504 Tsu06g01380 06 13022028 13029739 PCT