Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03709 ATGGCTTCTCCTTCTTCAACACGCTTAGATCTCGACGGTAACCCAATCAAACCTTTAACAATTTGCATGATCGGTGCCGGAGGTTTCATCGGTTCTCATCTCTGTGAAAAACTCATGTCTGAAACTTCTCATAAAGTTCTCGCTTTAGATGTTTACAGTGACAAAATCAAACATCTTTTAGAACCTGAATCTCTTCCTTGGAATGGTCGCATTCACTTTCATCGTCTTAATATTAAGAATGATTCTAGACTTGAAGGTCTCATCAAGATGGCAGATCTGgttatAAATCTGGCTGCAATTTGTACTCCTGCTGATTACAATACGCGTCCTCTTGATACAATTTATAGCAATTTCATTGATGCACTTCCTGTGgTGAAGTACTGTTCTGAAACTAATAAGAGGCTTATTCATTTCTCTACTTGTGAAGTGTATGGAAAAACTATTGGAAGTTTTCTTCCAAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTATTTGCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTCCAATCGAAAAGCAGAGATGGTCGTATGCATGTGCAAAGCAGTTGATTGAGAGACTGGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTTACAATTGTGAGGCCATTTAATTGGATTGGACCCAGAATGGACTTCATTCCCGGTATTGATGGTCCAAGTGAGGGTGTTCCTCGAGTTCTTGCATGCTTCAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGATGGTGGTGAATCCCAGAGAACCTTTGTTTACATCAAAGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGAGCCAATGGCCACATCTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAACTTGCTGAAATGATGACCAAGGTCTATTCAAAGGTTAGCGGAGATCAACCTCCTGAAACACCTACAATTGATGTGAGCTCGAAAGAATTTTATGGTGAAGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTCGGATGGAATCCAAAGACCTCACTTTTTGATCTGCTTGAATCCACACTTACCTATCAGCACAGGACATACGCCGAAGCCATTAAGAAAGTCATTGCACAACCCAATACAAGTTAA 1173 0.4049 MASPSSTRLDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYSDKIKHLLEPESLPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSETNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDESPCIFGPIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTKVYSKVSGDQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLFDLLESTLTYQHRTYAEAIKKVIAQPNTS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03709 390 Pfam NAD dependent epimerase/dehydratase family 21 291 IPR001509 -
Tsu02g03709 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 373 IPR036291 -
Tsu02g03709 390 PANTHER UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2-LIKE 7 387 - -
Tsu02g03709 390 Gene3D - 19 381 - -
Tsu02g03709 390 CDD Arna_like_SDR_e 20 375 IPR045869 GO:0016831
Tsu02g03709 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03709 Tsu-Chr2 41947762 41951052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03709 K12449 - gmx:100792879 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03709 02 41947762 41951052 Tsu02g03709 02 41947762 41951052 ECH
Tsu02g05178 02 60758832 60763325 Tsu02g03709 02 41947762 41951052 PCT