Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03656 atgggATTCTCCAAAATCtctatgtttctttttttcttcattttattttcttcctcaTATGCAACTTCTCGTACAATACTTCATCAAGAATTTCAATCAACAACAAAAGTTTCACCAAACAACCGTGCTGAAAAGCTTATAAGAAGTTTCAACTTATTCCCAAAGGATCCAGTTAACATAATTCATGGTAATCACACTCTTGATTTTGTCCCCGGAAAGATCGTCGAGAAGAAGTTCTCATTTTTTGGTGATTCCGAACAACCTTCCGTTGAAACTCTTGGTCACCATGCTGGATACTATTCGCTTCCTCGTTCCAGCTCCGCAAGGatgttctattttttctttgaatcaAGAAACAATAATAAGGATGCCCCAGTTGTGATATGGTTGACTGGAGGTCCAGGTTGTAGTAGTGAAATTGCTTTGTTTTATGAGAATGGTCCTTTTACAATTGCCAATGATTTATCTCTTAAATGGAATGACTATGGTTGGGATAAGGCATCAAATATCCTTTTTGTTGACCAACCTATTGGGACAGGTTTTAGCTACACTTCTGATGATAGTGATATTCCTCATGATGAAACTGGTGTTAGCAATGATTTGTATGACTTCTTACAGGAATTTTTCAAGCAACACTCTGATTATGTTAAGAATGATTTTTATATTACTGGAGAATCATATGCTGGACACTATGTCCCAGCTCTTGCATCTCGTGTTCATCAAGGAAACAAGGACAACAAAGGAATTAAAATTAACCTTAAGggTTTCGCTATTGGTAATGGATTGACCAACCCAGCAGTTCAGTATCCAGCCTACactaagtttgcagttgataaCAAATTGATTACAAAAGAAGATGAAGCTGATATCAACAAGTCCGTCCCCGGTTGTGTGGCTGCCGCAAAAACTTGCGAGAGTGAAGGTGGAGATAGTTGCTTAACAGCCTTAAATGATTGTGAAGAGATTATGAATAGTATCTTGTCCATTGCTGGAAACATCAATTACTATGACATCAGAAAGCAATGTGAGGGACCATTATGTTATGACTTCTCAAATGTGGAGACACTTCTAAATAAGAAATCAGTTAAGGATGCTTTAGGTGTTGGAGACATAGAATTTGTTTCATGTAGCAAAGTTGTGTATAATGCTATGTTGCAAGATTGGATGAGAAACTTGGAAGTGGATATTCCTTCACTTCTTGAGGATGGAATTGATGCtcttatatatgcaggggaatttgattttatttgcaATTGGATTGGAAACTCAAATTGGGTTCATGCAATGGAGTGGTCAGGTCAAAAACAGTTTGCGGCGTCTAAAACAGCGCAATTTTTGGTTGATGGTAAAAATGCAGGATTATTGAATAGTTATGGACCTCTATCTTTTCTAAAGGTGTTTGGGGCAGGACATATGGTCCCTAAGGATCAACCAAAAGCTGCACTTCAGATGTTGGTCAACTGGACCCAAGGAAAACTTAATGGGACAAGcatttaa 1497 0.352 MGFSKISMFLFFFILFSSSYATSRTILHQEFQSTTKVSPNNRAEKLIRSFNLFPKDPVNIIHGNHTLDFVPGKIVEKKFSFFGDSEQPSVETLGHHAGYYSLPRSSSARMFYFFFESRNNNKDAPVVIWLTGGPGCSSEIALFYENGPFTIANDLSLKWNDYGWDKASNILFVDQPIGTGFSYTSDDSDIPHDETGVSNDLYDFLQEFFKQHSDYVKNDFYITGESYAGHYVPALASRVHQGNKDNKGIKINLKGFAIGNGLTNPAVQYPAYTKFAVDNKLITKEDEADINKSVPGCVAAAKTCESEGGDSCLTALNDCEEIMNSILSIAGNINYYDIRKQCEGPLCYDFSNVETLLNKKSVKDALGVGDIEFVSCSKVVYNAMLQDWMRNLEVDIPSLLEDGIDALIYAGEFDFICNWIGNSNWVHAMEWSGQKQFAASKTAQFLVDGKNAGLLNSYGPLSFLKVFGAGHMVPKDQPKAALQMLVNWTQGKLNGTSI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03656 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 492 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 SUPERFAMILY alpha/beta-Hydrolases 94 492 IPR029058 -
Tsu02g03656 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Tsu02g03656 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 492 - -
Tsu02g03656 498 Gene3D alpha/beta hydrolase 75 496 IPR029058 -
Tsu02g03656 498 Pfam Serine carboxypeptidase 92 490 IPR001563 GO:0004185|GO:0006508
Tsu02g03656 498 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03656 Tsu-Chr2 41122049 41125802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03656 K16298 - gmx:100798795 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03656 02 41122049 41125802 Tsu02g03656 02 41122049 41125802 ECH
Tsu02g03656 02 41122049 41125802 Tsu02g05131 02 60350182 60373171 PCT