Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03619 ATGATTCCAACTCGTTCTTCATCTCAGAATCATAACAAGAAGATGAAACCAACACCAACATCAACAACTCCTAGTCCTTTACGGAGATCTGAGAGAAATCGGAACGTTTCATCTTCTTCTACTTCTATCAATCAACATTCACCTGTTACTTCTAGAGCTTCTATTTCTAAGAGACACGTGTCGCCGAAAGAGAAGAAGAATCCtgatgaagaaaaagatgtGGAAGTTTCGTTGAATCGGAAAGTTAAGAAAATGGATGCCCGTGTTTATCGAAAAATTTTAACtcgaaagaaaaataaagATTGCCAAAAGGAGACAAATAACAAGGATGCGGATAGGTCGACTCCAGAAGATAGCAATGTGGGTGGTGGCAATACCGATGAGGACTTGAAGGAGACTAGTTTACATTGTAAAGAAGTTTTTGAGGATTTTAATCTTCCGGCTGAAGATGCCAAAGCAACAGATATGAGTGCGGAGTCTAGGTCGAGTGGGTCTGTGAAAGAATTATCAGAAAATAATAATGCGACTACAGGTTCAACGGTGGTACCATCTAATTCCAGTACTCACGAGACTAGTGGGATACctgaaaaaattgaagaggaGACATCGCAAATGTTAGCAATTATGGGTTCAGATTCAAGTGAAAATTTGATTAGGAAATGTATTGTAAATAATAAGGGTGAAAATTTAACACcttttaaaagaaaaagcaCAGTGGTGGGTAAGTGTTCTGATGTTTCTGCTACATTGGTTAATGATGACAACTGCAACTTAATTGTGGATTCCGACCCTGAAAGGCTAGAGACCAGTAGGCCTTCAAAAAGGATAAGGGGGATCAATAATGTTGACCAACCTGCTTCAAAATCTAATGATGAAAAGTCATGTACCAGAAACAAGGAAGGAAAATCAGGAGATTCAGTGGAGAAACCTCAAGTAAACAATGTTGAAACTGAGGAAATAAGGAAACAGCAGAGAAGCTTACATCTTTCACTGAAGCCGCAGATATCAAAGCTTTGTGAAATTCTTCTTCTCCCGGATAATGTCAAGAGTATGGTTGGAAAATTTCTTGAATATACCATGAACAATTACAAGATCTGTACAGAACCAGTATCAATATTACAAGCTTTTCAATTATCTCTGTGTTGGACTGCTGCTTCTTTGCTAAGGCACAAATTTGACACTGCAGCTTCCCTCATTCTTGCAAAGCAGCACTTGAATTTTGACTGTAAGAAAGACGCGGTTGATGAAATTAATACAATGCTGTGGGATCTGAAGGACAGGTTTTTATTACTCACAGAAAACACAAATGTCAATTGCTCTCCAAAGGCTTCTGAATCATCAAATGTGGTTCGTTCAAACACAGATATAACATCAGATGTTGAAATGACCAAAAAAGGTATTTGCAGAAATATTAAAGTAAGTCAGAAGGACAAAGACCAATGGAGAAATCTACATCGTATGCATCAGGAAAATAAACgtaatttgaaaaaagatttgGACAAGGAAATAGCTGATTTTAAAACAGGGCGCCAAATAGAGTGGAACGCTATCATCAGACCCTCtatgaaaaaagaagagaagaccAAAAACCAAGATATACTAAAACGCTTTAGAAGTAAGTTTACTGCTGGAATTGCAAAATTGAGAAGTGAGTATGATGAACGTCTTAAGACTCTTGAGACCAAATATTTAGAAGCACGGCAGAAATTCCTAGAGTCATCGGCACCAGATGAATTGTCAAACCTAAATTCTTCAAAGGAACTCAAAACCCCCCATAATTCTCCAAAAGTCCTTCTGTCCGATGAAGTGCCAGAAACTAGTCGTGAACGGGCCACTGCCAGTGAATTGAGTAGGGACACGGCTGTGGGATTGCCCAGCACAGTCAGTAATGATTATCCAGAGAATGCAGCTCCTTTGAATTCTTCATCCACAGATCAAATATCTGATGGAGTTTTAGATGGGGTTGTATCATCAAGGCCCTGTAGCTCTTCTAGTCCAAGCAATGGTCGTCCAGCTACAATTTACCTTTTGAAGTCACCTCCTTCAACTCAACAATTTCCTGACAGAGTCTTGCCGACCGTAACTGATGGACAAATATCAGTCACAGTGCCAGAGTTGAGTAGGGAGGCAGCTGTGGGGTTTCCTAGCACAGTTAGAAGTACTGATTGTCCGGAGAATGCAGCTCCTCTGAATTCTTTATCAACAGATCGAATATTTTATGTAGGTTTAGATGGGGTTGTATCATCAACGCCTTGTAGCTCTTCTAGTCCAAGCAATGGTCGGCCAGCTACAATTTCCCTTTTGAATTCACCTTCTTCAACTCAACAAATTCCTGGCAGTGTGTTGCCAGCCATAACTGATGGACAAATACCAGTCACAGTGCCAGAAAATAGCCCTGTAGAGGCTGAATGTCAATTAAGAGACAATGTGGTAGTGAATGAGAGTACTAAATCAGACTACCGGGAAGTAGCAGATAGAACTATGACAGAAAACACTTTGTCCCAGGAGACTCCAGTATCTATACCAGTGGATCCAATCGAGCCTCAAGAACAAGTGCAGGTGCAGCCATTATTATCTGTAGAGTCACTGCCTAGTCCAGCTTGTACTTTACCTGCTAATCAATCCAACCATGTTTCAATGGTCATGGAGCCTCCAGAGCAGCTGCAGCAAATACATTCTTCAGGGCTCCTTTCTTCCAACCTGGATTCCTCTAGCTTACCTTCGGCTACTGGAGGTGAACACTGGGAAGCGACCAATGAAGATGCTCTCTCCAGCCAGATTCCCGTGGCATCAACCGAGGTTCAAAATCAAGCCGTTGAGCAACCTGCCTCGAACTTGGAAATTGATTCACATTCACGTCAAGTTGTGCCTCCTGTCTCAAACATGGTCCTTGATTCCCTTGTGCCTGGTGGAGTCAGAGCCCAATCATTAGACACAAGAAATATGTCAACTCACAGAGTTATCAATAGTCATCCTATTCAAACTCCAGTACAATCAGCTTCGAGGAATGTTCAACCTTTCTTCTATGATCCACTTAATTATGAATTGGCAAAAATACGTAAACTgatggaagaaaatatgaaaaaacatGAAGTTGAGAAATTACAGCTGAAATATAATTTTGAGAAGCAAATTGATGAACTTCGCAGGAAGTATGATATTCAAATGAAGGAGATTGAGGTTAAATTTCAGGAAGATGGGAAGACCTATGATACACAATATAAAACAGTTTTTTTACACAAGATATTGGCCGAAACTGTTATAAGGGCTAATTTTGATCCTATGTTTTCTGGTGCATCGGGAATGCTGCAAGGTATACTCCCTTATGATCCAGGATATTCACAGCATTTATTTCATCCTTCAAGACAGCCAAATGGTACTTGGCCCTCTCCAGTTGCTAGTCAATCTTGCCGTGGACCTCCTGCAACCGCTTTCCAGAATTCTCACACTTCAACTGGCTCTCACACTATGGTACCACCACCTATACAGGCCTCGTACAATACATCGGGAAATTCCAGTGGTATTTCTGCAAGACGACCACATATCAACTCCATCTCTTCATCCTCAAGAAATCTTCAAGCTGGTGGGGAGATACGTGCCCGTCCACTGCATCCCACGCCTTATAGACCTTCAACATCTGTACCGGCCTCCAGTCTCAGTAGGGAGATCCGTGCTCCTCCACCGCATCTCTCGCCTTATAGACCCTCAATATCTGGACCAACCTCCAGTCTTGGTGGGGAGATGCGCACCCCTGCACCACACCTCTCGCCTTATAGACCCTCAACATCTGGACCAGCCTCCAGTCTTGGTGGGGAGATACGCACCCCTGCACCGCATCTTTTGCCTTGTAGACCCTCAACATTTGTACCACCCTCTAGTCTCGGTGAAGTTCCACATGGTATGCCAAGTCAGCCAGCACCTGGTAACTCTCAGCGGCTTCCCAGACCAATGCCGGCATTCTCTCAGTTTGGTCCTCATAGGGGGCATGGGCATGAGAACACAGGTGTGTTCTCCACTCCTAACGTATCTGCCATGGATATGCGCATGAGTGCTAATAATCAATCTAGCATTAATCTGCCAAATACTCAGCAACGTATGTCAGATTTGGCTTCGAATAATTCTCAATTTGGCACAAGTAGCAGCATGCCGGCTACCTTGGTCCAAGAAGCCACACCTTCTGATGTTGTCTGTTTATCAGATGATGACTGA 4209 0.4139 MIPTRSSSQNHNKKMKPTPTSTTPSPLRRSERNRNVSSSSTSINQHSPVTSRASISKRHVSPKEKKNPDEEKDVEVSLNRKVKKMDARVYRKILTRKKNKDCQKETNNKDADRSTPEDSNVGGGNTDEDLKETSLHCKEVFEDFNLPAEDAKATDMSAESRSSGSVKELSENNNATTGSTVVPSNSSTHETSGIPEKIEEETSQMLAIMGSDSSENLIRKCIVNNKGENLTPFKRKSTVVGKCSDVSATLVNDDNCNLIVDSDPERLETSRPSKRIRGINNVDQPASKSNDEKSCTRNKEGKSGDSVEKPQVNNVETEEIRKQQRSLHLSLKPQISKLCEILLLPDNVKSMVGKFLEYTMNNYKICTEPVSILQAFQLSLCWTAASLLRHKFDTAASLILAKQHLNFDCKKDAVDEINTMLWDLKDRFLLLTENTNVNCSPKASESSNVVRSNTDITSDVEMTKKGICRNIKVSQKDKDQWRNLHRMHQENKRNLKKDLDKEIADFKTGRQIEWNAIIRPSMKKEEKTKNQDILKRFRSKFTAGIAKLRSEYDERLKTLETKYLEARQKFLESSAPDELSNLNSSKELKTPHNSPKVLLSDEVPETSRERATASELSRDTAVGLPSTVSNDYPENAAPLNSSSTDQISDGVLDGVVSSRPCSSSSPSNGRPATIYLLKSPPSTQQFPDRVLPTVTDGQISVTVPELSREAAVGFPSTVRSTDCPENAAPLNSLSTDRIFYVGLDGVVSSTPCSSSSPSNGRPATISLLNSPSSTQQIPGSVLPAITDGQIPVTVPENSPVEAECQLRDNVVVNESTKSDYREVADRTMTENTLSQETPVSIPVDPIEPQEQVQVQPLLSVESLPSPACTLPANQSNHVSMVMEPPEQLQQIHSSGLLSSNLDSSSLPSATGGEHWEATNEDALSSQIPVASTEVQNQAVEQPASNLEIDSHSRQVVPPVSNMVLDSLVPGGVRAQSLDTRNMSTHRVINSHPIQTPVQSASRNVQPFFYDPLNYELAKIRKLMEENMKKHEVEKLQLKYNFEKQIDELRRKYDIQMKEIEVKFQEDGKTYDTQYKTVFLHKILAETVIRANFDPMFSGASGMLQGILPYDPGYSQHLFHPSRQPNGTWPSPVASQSCRGPPATAFQNSHTSTGSHTMVPPPIQASYNTSGNSSGISARRPHINSISSSSRNLQAGGEIRARPLHPTPYRPSTSVPASSLSREIRAPPPHLSPYRPSISGPTSSLGGEMRTPAPHLSPYRPSTSGPASSLGGEIRTPAPHLLPCRPSTFVPPSSLGEVPHGMPSQPAPGNSQRLPRPMPAFSQFGPHRGHGHENTGVFSTPNVSAMDMRMSANNQSSINLPNTQQRMSDLASNNSQFGTSSSMPATLVQEATPSDVVCLSDDD 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 650 739 IPR039322 GO:0031507
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 602 650 IPR039322 GO:0031507
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 290 319 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 575 672 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1124 1270 - -
Tsu02g03619 1402 Gene3D - 1008 1088 - -
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 22 106 IPR039322 GO:0031507
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1366 1388 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 57 84 - -
Tsu02g03619 1402 Coils Coil 1038 1058 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1 56 - -
Tsu02g03619 1402 PANTHER - 865 1220 - -
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 1245 1269 IPR039322 GO:0031507
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 1270 1402 IPR039322 GO:0031507
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1366 1402 - -
Tsu02g03619 1402 PANTHER - 784 865 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 274 289 - -
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 740 785 IPR039322 GO:0031507
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 784 865 IPR039322 GO:0031507
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 108 601 IPR039322 GO:0031507
Tsu02g03619 1402 PANTHER - 22 106 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 619 672 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 575 591 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 263 319 - -
Tsu02g03619 1402 PANTHER HELICASE PROTEIN MOM1 865 1220 IPR039322 GO:0031507
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1 129 - -
Tsu02g03619 1402 Coils Coil 549 569 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 157 192 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 1124 1194 - -
Tsu02g03619 1402 Coils Coil 478 498 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 148 195 - -
Tsu02g03619 1402 PANTHER - 740 785 - -
Tsu02g03619 1402 PANTHER - 650 739 - -
Tsu02g03619 1402 PANTHER - 1245 1269 - -
Tsu02g03619 1402 PANTHER - 1270 1402 - -
Tsu02g03619 1402 PANTHER - 602 650 - -
Tsu02g03619 1402 PANTHER - 108 601 - -
Tsu02g03619 1402 MobiDBLite consensus disorder prediction 96 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03619 Tsu-Chr2 40620884 40633076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03619 - - mtr:MTR_4g058650 1599.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03619 02 40620884 40633076 Tsu02g03619 02 40620884 40633076 ECH
Tsu02g05108 02 60081975 60095343 Tsu02g03619 02 40620884 40633076 PCT