Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02067 ATGGCAACTAATGGAGATCACCAAACAACATCTAAGCAACCTCCCATGCCATCTCCACTGCGTTTCTCCAAATTCTTTCAGTCGAACATGAGAATCCTAGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTTGTTGATAGATTGatggaaaatgaaaagaatgagGTCATTGTTGCTGATAACTACTTCACTGGATCGAAGGACAACCTCAGAAAATGGATTGGTCATCCAAGATTTGAACTTATCCGTCATGATGTCACTGAGCCTTTGATGATTGAGGTGGATCAGATCTACCATCTCGCTTGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTAAAGACAATAAAGACAAATGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAACGAGTTGGAGCAAGAATTTTGCTTACATCAACTTCGGAGGTATATGGGGATCCTCTTGAGCATCCTCAAACTGAGAACTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGAAATCCGTGTTGCGAGAATCTTCAACACATATGGTCCGCGCATGAATATCGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGTGGCGAGTCCTTGACAGTCCAATCTCCAGGAACGCAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTTGATGGTCTTATCCGTCTCATGGGAGGATCGGACACTGGTCCAATCAATCTTGGAAACCCAGGTGAATTCACAATGCTTGAACTTGCTGAGACGGTGAAGGAGCTTATTAATCCAGATGTGGAGATTAAGATAGTGGAGAACACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACCAAAGCAACTGAAGTGCTTGGCTGGGAACCAAAGGTCAAGCTGCGCGATGGTCTTCCTCTTATGGAAGGAGATTTCCGTTCGAGGCTTGGAATCGAGAAGAGCATATAA 1032 0.437 MATNGDHQTTSKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTENYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPDVEIKIVENTPDDPRQRKPDITKATEVLGWEPKVKLRDGLPLMEGDFRSRLGIEKSI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02067 343 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 2 341 - -
Tsu02g02067 343 Pfam GDP-mannose 4,6 dehydratase 33 327 IPR016040 -
Tsu02g02067 343 CDD UGD_SDR_e 30 334 - -
Tsu02g02067 343 Gene3D - 29 335 - -
Tsu02g02067 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 336 IPR036291 -
Tsu02g02067 343 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 2 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02067 Tsu-Chr2 20108066 20111783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02067 27 326 Miscellaneous Gene Families AT1G02000 24.179 8.16e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02067 K08678 - qsu:112026144 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02067 02 20108066 20111783 Tsu02g02067 02 20108066 20111783 ECH
Tsu02g05178 02 60758832 60763325 Tsu02g02067 02 20108066 20111783 ECH
Tsu02g02067 02 20108066 20111783 Tsu02g05178 02 60758832 60763325 PCT