Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01722 ATGGCGGTGGAGTACACATGCTGCGAATCGGAGTTCTTCGTTCACATATTGATAATCGTTCTGTTGGTGGTGTTCGCCGGATTAATGTCAGGTCTTACTTTAGGTCTCATGTCTCTTAGTCTCGTTGATCTTGAAGTTCTCGCTAAGTCCGGTACTCCTCACGATCGTAAACACGCCGAGAAGATATTGCCTGTTGTGAGAAATCAGCATTTGTTGCTTTGTACCTTGCTAATTTGTAATGCCGCCGCTATGGAGGCACTTCCTATTTTTCTTGATAGCCTTGTTACTGCTTGGGGTGCTATCCTGATTTCGGTCACATTGATTCTTCTCTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGATATGGTTTGGCTATCGGTGCATCAGTGACTCCTTTTGTCCGTGTGCTTGTATGGATATGTTACCCAGTTGCTTTTCCAATTAGCAAGTTGTTGGACTATTTGCTGGGCCATCGACAGGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTCGTAGATTTGCATGGCAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACAATAATTGCTGGGGCACTTGAACTTAGTGAGAAGACAGCCGGTGATGCCATGACTCCTATATCTGAAACATTTGCCATTGATATTAATTCAAAGCTTGACAGGGGACTGATGAGTGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTATTATGAGCAGCCTACAAATATTATTGGACTTATACTGATCAAGAATTTATTGACAATTCATCCAGAAGATGAAGCACCTGTAAAGAGTGTAACCATACGCAGGATACCAAGGGTTCAAGAAAGCATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGACATAGTCACATGGCTGTTGTTGTAAGACACTGTGGCAAGACCAAGCAACCCTCTTCCAATAATTATGCAAATGAATCAGTGAGAGAAGTGAAGGTGGATATTGATGGTCAGAAGCCTCTCCAAGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTTTCCAAATACAAACAAGTCAAATAGGGGCAGTTCTCGGAGCAGAAAATGGACAAAAAATATGTACTCAGATATTTTAGAGATAGATGGTAGTCCCCTTCCAAATATccccgaagaagaagaagctgtTGGAATAATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATATTTGATGAAACAGATCATCATTTTGAAGACTCATGA 1278 0.41 MAVEYTCCESEFFVHILIIVLLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPHDRKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLLGHRQEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTAGDAMTPISETFAIDINSKLDRGLMSEILEKGHSRVPVYYEQPTNIIGLILIKNLLTIHPEDEAPVKSVTIRRIPRVQESMPLYDILNEFQKGHSHMAVVVRHCGKTKQPSSNNYANESVREVKVDIDGQKPLQEKVLKPKIPIQKWKSFPNTNKSNRGSSRSRKWTKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01722 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Tsu02g01722 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Tsu02g01722 425 Gene3D - 191 324 IPR046342 -
Tsu02g01722 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Tsu02g01722 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Tsu02g01722 425 Gene3D - 379 417 IPR046342 -
Tsu02g01722 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Tsu02g01722 425 CDD CBS_pair_CorC_HlyC_assoc 205 312 IPR044751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01722 Tsu-Chr2 15148264 15153409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01722 K16302 - gmx:100801937 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01722 02 15148264 15153409 Tsu02g01722 02 15148264 15153409 ECH
Tsu02g01722 02 15148264 15153409 Tsu08g04235 08 60407345 60410780 PCT