Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01598 ATGGAAGCTACATCCAAATACAGAAGATACAAAAAGTGTGATTTATCTCCCACAAACATTTGCAGTTCTCATCAACATAGTGGAGAAATGAAAGCATCCTGCAAAGGTTGTTGCAGTTTTTTATGTAATGTTTGTAATTCAACTTCAAGAGAAAACTGCTTGGTTGGTTCAGTGAAGAAAATTGGAACCAAATTGTTCAAACTTGATAATTCAAACAAGAATGGAAATTTGCTTGGTTGGTCgtcgtcgtcatcatcatctCCTTCGGTGTTCTTTCCCTCACCTTTGCCTAGAAGATATAACAAGCGTGCGGTTCTTTGTGGAGTTTCTTATGCAAAAAGGAAATTCAGGCTTAAGGGAACCATTAATGATACCATTAACATGAAGGAGCTTCTGATTAAGACTTTTAAGTTTCCAATTGACTGCATAAGAGTTCTCACAGAACAAGAGCAGAATGCCAACTTAATACCAACAAAACACAACATATTGGAGTCCTTAAGGTGGCTTGTGAAGGACTGTGAGGCAGGCGACTCGttagtcttttatttttccGGACACGGTTTGCAACAGCCAGATTTTAAGGAAGATGAAATTGATGGGTTTGATGAGACTCTTTGTCCTGTTGATTTCATAAAAGAAGGAATGATTCATGATAATGACTTAAATTCTACCATTGTTTGGCCACTCAAAAAAGGTGTCACACTTCATGCTATTGTTGATGCCTGTCATAGTGGAACAATTCTTGATCTTTTACATGTCTATAACTATAAAAGAGGCATTTGGGAGGATAACAAGCCACCATCTAAAGAACCTATGAGAAAACATACAAGTGGTGGATTGGCTATTTGTCTCAGTGCTTGTGAGGATAGCCAAATGGCTACTGATAGTGCGGTTTTTGGTGGAAAGGGAATGAATGGTGTTTTGACTTAtcttttgacaaaaacaattaGAGAAAATCCATCTGGAATTACTTATAGGGGTCTACTGGCAAAGATGcatgatgaaattaaaaagattaACAGAAGAAGCAGATCATGCAATAATCGCATCTTGCACCATATATTCCATAGTAAAATTATTGCACAGGATCCTCTTTTATCATCATCTGAGAAATTTGATGTTTCTACAACAGTATTCACTTTGTGA 1146 0.3508 MEATSKYRRYKKCDLSPTNICSSHQHSGEMKASCKGCCSFLCNVCNSTSRENCLVGSVKKIGTKLFKLDNSNKNGNLLGWSSSSSSSPSVFFPSPLPRRYNKRAVLCGVSYAKRKFRLKGTINDTINMKELLIKTFKFPIDCIRVLTEQEQNANLIPTKHNILESLRWLVKDCEAGDSLVFYFSGHGLQQPDFKEDEIDGFDETLCPVDFIKEGMIHDNDLNSTIVWPLKKGVTLHAIVDACHSGTILDLLHVYNYKRGIWEDNKPPSKEPMRKHTSGGLAICLSACEDSQMATDSAVFGGKGMNGVLTYLLTKTIRENPSGITYRGLLAKMHDEIKKINRRSRSCNNRILHHIFHSKIIAQDPLLSSSEKFDVSTTVFTL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01598 381 Gene3D - 46 381 - -
Tsu02g01598 381 PANTHER METACASPASE-4 24 381 - -
Tsu02g01598 381 Pfam Caspase domain 102 370 - -
Tsu02g01598 381 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 24 381 - -
Tsu02g01598 381 SUPERFAMILY Caspase-like 105 339 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01598 Tsu-Chr2 14027075 14029187 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01598 K22684 - gmx:100796640 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01598 02 14027075 14029187 Tsu02g01598 02 14027075 14029187 ECH
Tsu02g01598 02 14027075 14029187 Tsu08g04308 08 61036088 61041166 PCT