Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00365 ATGTCAAATAAAACCATTCTCGTCACCGGCGGAGCCGGTTACATCGGCAGCCACACCGTCCTTCAGCTTCTTCTCGGCGGTTACAAAGCCGTCATCGTAGATAATCTCGACAATTCTTCTCAAAAATCCATCGACAGAGTCAAACAACTCGCCGCTGATTTCGCCGCTAATCTTTCATTTCATAAGTTGGACTTGCGAGATAGAAAAGGGCTCGAGAGTATATTTTCTTCTACAAAGTTTGATGCGGTTATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTGCAAAAACCACTGCTCTACTATGACAACAATTTGATTGGGACAATTGTTCTATTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCCTCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTCCCTTGCACTGAAGAGTTCCCTTTGTCAGCTGCAAGCCCATACGGAAGAACCAAGctaTACATTGAAGAATTTTGTCGTGATATCTACCGTTCAGATTCAGAGTGGAAAATAACACTGTTGAGATACTTCAACCCTGTTGGGGCACATCCTAGTGGTCAGATTGGCGAGGATCCTCGTGGAATTCCCAACAACCTTATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCCCTGCATTGACAGTTTTTGGAACAGATTATAGTACAAGTGATGGAACCGGAGTTCGCGATTACATTCATGTTGTTGATCTAGCAGATGGGCACATTGCTGCATTGCGTAAACTAGATGATCCTAAGACAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCGGTTTTTGAGATGGTTAAAGCTTTCGAACAGGCCTCTGGAAAGAAAATTCCAATTGTAAAGGCTGATCGGAGACCTGGAGATGCTGAAGTTGTTTATGCATCAACAGCAAAAGCAGAAAAAGAACTGAACTGGAAGGCAAAACATGGCATCGATGATATGTGCCGTGACCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGAATCTAATTAA 1041 0.439 MSNKTILVTGGAGYIGSHTVLQLLLGGYKAVIVDNLDNSSQKSIDRVKQLAADFAANLSFHKLDLRDRKGLESIFSSTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAASPYGRTKLYIEEFCRDIYRSDSEWKITLLRYFNPVGAHPSGQIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTSDGTGVRDYIHVVDLADGHIAALRKLDDPKTGCEVYNLGTGKGTSVFEMVKAFEQASGKKIPIVKADRRPGDAEVVYASTAKAEKELNWKAKHGIDDMCRDQWNWASKNPYGYGESN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00365 346 Gene3D - 194 335 - -
Tsu02g00365 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Tsu02g00365 346 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Tsu02g00365 346 Gene3D - 6 275 - -
Tsu02g00365 346 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 345 - -
Tsu02g00365 346 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Tsu02g00365 346 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 345 - -
Tsu02g00365 346 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00365 Tsu-Chr2 3060629 3064242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00365 5 319 Miscellaneous Gene Families AT4G00110 27.027 1.60e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00365 K01784 - zju:107429837 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00365 02 3060629 3064242 Tsu02g00365 02 3060629 3064242 ECH
Tsu05g00214 05 1564770 1569575 Tsu02g00365 02 3060629 3064242 PCT