Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02533 ATGGGGACAACTGAGAAACTTCAACGATCACTTGATCAACTCATTAATGGGTTAGATCCAAGCCAACAAGGATTGCCGGAGGACAACATTAGTTATGCTACATGTCTGAAAATGTTAGACCAGATTCCATCCTTATCAAAAGGGTCACATATACACTTCAAGGTTGTGAGGATGCTTGCCACTAAAGAACATAGGATGGAATTGGTATCTTCGGATGAGAAAACAAGTTTTTTGGCAATTGGCCAGGCTTCTTCTTATAGAAATGTCCAAGAGCGGTTTCAACATTCAGGATCAGTTCATGATGCAAAGATTCTTATGGATACTCTTCATAGACCAAACTTGCAATTTCCTTATCCTCCCGAAGGTTTGTATGAAGAACAAGTCCTTCATAATCCCACCACCGCCACATCATCACTCCCACCTCCTCCGCCGGCGGAGTCTTCCACCACCACCGCAACCGAAAATCTATCTATCAAAGAAAACGAAATTTCAATTGAAGAGAAACTAATTGAATATTCCAACGACGCAAACGCTCTTAGGTCTTTGGTTGAGGAAAATGTTAGAGCGCGAAAATTCAACAAAGCAATTCGTGCTGTGGACCGTTTAATTGAACTCGAACCAGAGGATTTAGCTTTGATAGTACTAAAATCGCAGTTGCATAGTTACAATGGTGAACATAAATTGGCTAAGAAAGGGTTTGAACTTACTTTGCAGCAAGATCCGTTAAACTTGGCAGCTTATCGCGGTCTTATGATGGCAATTTCAAACTTGGAAGAACCAATGGAGGTTTTCTTGAACAAGGTTGATGAGATTGTGAAGTTTTTAGAGGAGAAAAAGATGGAATCAGAAGCTAGAGAATTTAAGCTTTTGATTGCGCAAGCGAAGGTGATGGAAGAGGATTTCTCTGGTGCATTGAAGGTGTATGAGGAAATTGCGAAGGAAGAACCGAGTGATTTTAGACCTTATTTGTGTCAAGGTGTTGTGTATACTATGCTTAGAAAGAATGATGAAGCTGAGAAACAGTTTGAGGAATATAAGAAACTTGTTCCAGAGAATCATCCTTATAAAAAGTATTTTGAGGATAATGCTAAGATTTTTTCCAAGAAGCTAGAGAAGGGAGGAATAGAAGCAAATATTTGA 1140 0.3947 MGTTEKLQRSLDQLINGLDPSQQGLPEDNISYATCLKMLDQIPSLSKGSHIHFKVVRMLATKEHRMELVSSDEKTSFLAIGQASSYRNVQERFQHSGSVHDAKILMDTLHRPNLQFPYPPEGLYEEQVLHNPTTATSSLPPPPPAESSTTTATENLSIKENEISIEEKLIEYSNDANALRSLVEENVRARKFNKAIRAVDRLIELEPEDLALIVLKSQLHSYNGEHKLAKKGFELTLQQDPLNLAAYRGLMMAISNLEEPMEVFLNKVDEIVKFLEEKKMESEAREFKLLIAQAKVMEEDFSGALKVYEEIAKEEPSDFRPYLCQGVVYTMLRKNDEAEKQFEEYKKLVPENHPYKKYFEDNAKIFSKKLEKGGIEANI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02533 379 Gene3D Tetratricopeptide repeat domain 285 377 IPR011990 GO:0005515
Tsu01g02533 379 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 128 373 - -
Tsu01g02533 379 Gene3D Tetratricopeptide repeat domain 159 284 IPR011990 GO:0005515
Tsu01g02533 379 Coils Coil 265 285 - -
Tsu01g02533 379 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 128 373 - -
Tsu01g02533 379 SUPERFAMILY TPR-like 175 355 IPR011990 GO:0005515
Tsu01g02533 379 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Tsu01g02533 379 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02533 Tsu-Chr1 27898902 27903707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02533 - - cam:101497721 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03811 07 44376371 44379556 Tsu01g02533 01 27898902 27903707 PCT