Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02030 ATGCATCCACGAGATATAGTAACGAACATTGGACATTTTGTTAATACTCCTACCACAATGGGCACTAGTTCTGAATATTTTGAGAAATTCACATGGAGAATTGAAGATTTCTCTAAAAAGAATGGCATGAAATTAAAATCTAAAGATTTCAAAATCCGAGGTTATACATGGAGGATCCTTGTTCATCCATTGAGGAAGGATGTTGaccattttacattttatttgatGGTGGCTGATTCTTTACCACCTTATGGATGGAATAGAAACACATTTTTCAAGTTGGTTCTAATTAATCAGCTGGATAAGAAAAAGTCCATCATAAAAGAGACTCAACAAAAGTTCAATGGAGGATATAGATGTTGGGGTTCATTTTTCCTAAATTTGAAAGACTTCAATGACCATAGAAAAGGGTATCTTGTGAAAGACACATGCATAATTGAAGTTCATATTTGTGTCTCCAACTTTGCACCCAAAATTCATGACATCAATTCTTTGAACCAAAATTCAACTCCAACAATAGATCAATCCTCAGATGAGAGGGAAATTCTTAGTCCAATAACATCAAGTTCTACTTCTAGTCCAAATGAAGAAGGAGAAATTAAAAGTTCAGATTTAACATTACGAGAATTTCTAGATTTCGATAGCTTAAAACCCGAGGAAAAATATCTTATTCCACTTTTAGACGAAGTTTGCACTTGGCGTCCGCATTTGATACAAAGTCAAATGAAAAAAACTCGTTTGTTTCGACAATGGGCGTTTACGACATTAGGTCAAGTTTTGCATTTTCTTAAGacaaagaatgtgaaagaaaTGAGTGAAGACGATATCAAGAATCTAAGAAGTTTGTGGGAGGAACTTGCGAAATCTTCGGAATTTGATTTGAGTTGGTTAGAGCCTTATGTTCAATCTGCTTTAGGTGTGAAAGTTCATTTGGAAAGagcaaagaaattgaagaaattaaaggaTAAAGTTGTTGCTTTGGATATTAAAATGAAGAAGCTTAGGGATGAATTGAGTGCCTCACAAGCACAATATGAGGTTGCAAGGAAAGACTTATTAGAAGTAAGAAATGGTTTCAAAGAAATGAATATTAATGCTCCAATAGGTTATGCTATGTTTTAA 1122 0.3235 MHPRDIVTNIGHFVNTPTTMGTSSEYFEKFTWRIEDFSKKNGMKLKSKDFKIRGYTWRILVHPLRKDVDHFTFYLMVADSLPPYGWNRNTFFKLVLINQLDKKKSIIKETQQKFNGGYRCWGSFFLNLKDFNDHRKGYLVKDTCIIEVHICVSNFAPKIHDINSLNQNSTPTIDQSSDEREILSPITSSSTSSPNEEGEIKSSDLTLREFLDFDSLKPEEKYLIPLLDEVCTWRPHLIQSQMKKTRLFRQWAFTTLGQVLHFLKTKNVKEMSEDDIKNLRSLWEELAKSSEFDLSWLEPYVQSALGVKVHLERAKKLKKLKDKVVALDIKMKKLRDELSASQAQYEVARKDLLEVRNGFKEMNINAPIGYAMF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02030 373 Coils Coil 317 351 - -
Tsu01g02030 373 Pfam MATH domain 34 150 IPR002083 GO:0005515
Tsu01g02030 373 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 27 353 - -
Tsu01g02030 373 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 27 353 - -
Tsu01g02030 373 ProSiteProfiles MATH/TRAF domain profile. 27 150 IPR002083 GO:0005515
Tsu01g02030 373 SUPERFAMILY TRAF domain-like 29 154 - -
Tsu01g02030 373 MobiDBLite consensus disorder prediction 170 201 - -
Tsu01g02030 373 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 26 170 IPR008974 GO:0005515
Tsu01g02030 373 MobiDBLite consensus disorder prediction 170 200 - -
Tsu01g02030 373 SMART math_3 29 131 IPR002083 GO:0005515
Tsu01g02030 373 CDD MATH 29 150 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02030 Tsu-Chr1 20780440 20784244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02030 - - gmx:100797919 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02030 01 20780440 20784244 Tsu07g04142 07 47208067 47209236 PCT