Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05217 ATGGTAGCTAAAATCAGGCAAAGTGTTAATAACTCTCATAACTCAACAAAACCAGTGGTTGGAGAGATTGATACTAATTCACCGATTCAGTCTGTTAAAGACGCGGTTTCTCTCTTTGGTGAAGTTGCTTCCTCTGCTGAAAATCCTACCATTAAGAAGTCAAAATCAAAACCTTATTCTGTTGAGAGTGTTTGGGCAAAGGAGGCACAACTTCACTTAGCAAAGGTAGAGCTGAACAAATTAATGGCGCGTCTGAAAAATGCGGAAACTACCAAGGGTCAACTCCTAGTGGAGCTTGAAAAATCTAAAACAACCGTTACGGATCTGAAACAAAAACTTAAAGTCATCACTGAATCTAGAGAGTTAGCAATTCAGGCAACAAAAGCTTCAAAGTGTCAAGCGAAACAGCTTCAAGAAAAAAAACACGGCAGTCTTAACGCGACCAATTGTAGTTCGAAAGAAGAGTCAGAATCTGCAATTCAAAGGTATAAATCTATAATTGCAGAACTTGATCTCGCAAAGCAAGAATTGAGGAAGATTCGTCAGGAGTGTAAGGAATCGATGGAAGTGAAAATTTCTGCCTTCAAGCGAGCAGAAGAAGCTAAAGATGCGATGGCAGCCTACACGGAACGAGCGTATGAGCTTTCGAATGAAATTTTAGCTGTACAAGAATCAATTCAGAAAATGAAGCTTTCATCTGTCGAAGCCAATCAACAGAAAGAAGAGATATTAGTTGAGAAAAATATTCTGGGCCAATCATATAAAGCCACCCTTGAAGAATCAGAAAAGAAATTGCTCGCTTTAAAGAAGGATTTTTGTCCGGGACTTGTCGAAAATCTTGAAGTGAAGTTTAATGAGACAATGAACGAAATATCGGCTCTTCAAAAGGAAATGGAAAATAAAAAGAAATCAGACTTTGAATCGCTGAAAAGTGTCACTTTTGTGCTTGATGATGCTAAGGAATCATTGCAGAAAGTATCAGAAGAGGAAGACTCTCTTAGAAGCATGGTGGAAGCTCTTAGGGTGGAATTGGAGAATGTAAAAAGAGAGCACTCAGTATTGAAGAAGAAAGAATGTGAAACTGAGTCCATTGTCAGGAATCTGCGTGGCGAGCTTCATAAAAGCGAGTTGGAGATTGAAGTCTACTTGGCAGAAGAATCTAAAGTTAGAGGAGCATCTAAGCAAATGATCGGGATGCTGAACCAGTTGTCCACCGAAACTGAAAATGCACGGCAGGATGCTGAAGATATGAAGATCAAGGCAATCGAAATGAAAGTGGAAGCTGAAGTCGCCGAACGTGCATTAGAAGATGCAGAAATGAAGCTTAAAGTAACATGGGAAGATGCAGAAGCGGCGAAAGCAGCAGAGGCGAGTATACTTAATCAAATTAGAGACTTGTCTGAAATGACAAATGCTGATCACGCCTCAATGTCTGAATCCGGTGCTAGAATCACAATCTCGAGGGAGGAATTCGAGTCCTTAAACCGCACGGTTGAGGAGTATGATAAACTAGCGAGCATAAAAGTGGCTGCTGCGACAGCGCATATTGAAGCCGCGATGGTTAGTGAAAATGAGGCTCTCAAAAAGTTAGAGGTAACTCAGAAGGAGATCGAGGAGATAAAGAAAGCAACACATGAGGCCTTGAAACAGGCTGAGATGGCTGAAAAAGCAAAAACAGCAGTGGAGACTGAGCTTAAAAGATGGCGCGAGAAACAGCACAAAAAGGCAGCAGAAACTGCAGCTCGAGTATTGGTCGAAAATCAAATGCCGTCGTCTTCATCATCATCATCACAGCGTTACAGGTTTAAACATCAGAATTCAATTCGGAAAAACACGGAGGTGAAAAAGTTGGAAAAAGGGAAGGTTTCGGTTTCAAAGAAAGTTCTAATGCATAATATCAGTGGGATCTTTCACAGGAAAAAGAGCATGCAGGTTGAGAAAGGATTTCCTTCTTACCTTCCAGGTGAGAATCCTTTGTGA 1980 0.4091 MVAKIRQSVNNSHNSTKPVVGEIDTNSPIQSVKDAVSLFGEVASSAENPTIKKSKSKPYSVESVWAKEAQLHLAKVELNKLMARLKNAETTKGQLLVELEKSKTTVTDLKQKLKVITESRELAIQATKASKCQAKQLQEKKHGSLNATNCSSKEESESAIQRYKSIIAELDLAKQELRKIRQECKESMEVKISAFKRAEEAKDAMAAYTERAYELSNEILAVQESIQKMKLSSVEANQQKEEILVEKNILGQSYKATLEESEKKLLALKKDFCPGLVENLEVKFNETMNEISALQKEMENKKKSDFESLKSVTFVLDDAKESLQKVSEEEDSLRSMVEALRVELENVKREHSVLKKKECETESIVRNLRGELHKSELEIEVYLAEESKVRGASKQMIGMLNQLSTETENARQDAEDMKIKAIEMKVEAEVAERALEDAEMKLKVTWEDAEAAKAAEASILNQIRDLSEMTNADHASMSESGARITISREEFESLNRTVEEYDKLASIKVAAATAHIEAAMVSENEALKKLEVTQKEIEEIKKATHEALKQAEMAEKAKTAVETELKRWREKQHKKAAETAARVLVENQMPSSSSSSSQRYRFKHQNSIRKNTEVKKLEKGKVSVSKKVLMHNISGIFHRKKSMQVEKGFPSYLPGENPL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05217 659 Coils Coil 277 304 - -
Trre9g05217 659 Pfam Weak chloroplast movement under blue light 22 574 IPR008545 -
Trre9g05217 659 Coils Coil 316 357 - -
Trre9g05217 659 Coils Coil 198 218 - -
Trre9g05217 659 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 21 625 - -
Trre9g05217 659 MobiDBLite consensus disorder prediction 585 602 - -
Trre9g05217 659 Coils Coil 400 441 - -
Trre9g05217 659 Coils Coil 71 98 - -
Trre9g05217 659 MobiDBLite consensus disorder prediction 1 24 - -
Trre9g05217 659 Coils Coil 523 571 - -
Trre9g05217 659 Coils Coil 163 190 - -
Trre9g05217 659 Coils Coil 365 385 - -
Trre9g05217 659 MobiDBLite consensus disorder prediction 585 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05217 Trre-Chr9 57238463 57241163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05217 - - psat:127117570 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05217 9 57238463 57241163 Trre9g05217 9 57238463 57241163 ECH
Trre5g01096 5 7675969 7679258 Trre9g05217 9 57238463 57241163 PCT