Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01096 ATGGTTGCGAAAATTCGGCAAAGTGCTACTGACTCTCCAACGCCGAATCCAAAACCAGAGGTTGGAGAGATTGATACCAGCCCACCTTTTCAGTCTGTTAAGGATGCTGTATCTCTATTTGGTGAAGGTGCTTTCTCTGGGGAAAGACCTATCCTTAAGAAGCCAAAAGCTTATTCTGCCGAGAGAGTTTTGGCCAAGGAGACGCAACTTCATGTAGCCGAAAAAGAGCTGAACAAGTTGAGGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGAACTGTCGATGATTTGACACAAAAGCTAAAACTTATCACTGAATCTAGAGAGTTAGCTATCAAGGCAACAGAAGCTGCAAAAACTCAGGCAAAACAAAAGTATGGTGACTCGGATGGAGTCAATGGTACCTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGGTATGCATCTATCATGACAGAACTTGATGCTGCTAAGCAAGATCTGAGGAAAACTCGTCAGGAATATGATTCATCCTCGGGTGCAAGAGTGTCGGCTGTCAAGCAAACAGAAGAAGCTGAAAATGCAATGAAGGAAAACACAGAAAGAGTATCTGAGCTATACAAAGAAATTTTATCTGTAAAAGAGTCGATTGAGCAAGAAAAGCTTGCATCGGTGGAAGCACAGCGACAGCAAGCATTGACATTATCTGAGAAAGACGCTCTTAGACAATCATACAAAGCTACTCTCGAACAATCCAAAAAGAAATTACTTGCTTTAAAAAAGGAATTCAATCCCGAGCTCACAAAAAATCTTGAAGCGCAGTTGGCCGAGACAATGAGTGAAATTGCGACTCTGCAGTCAGAAATGGAAAACAAAAGGTCATCTGACTTGGACTCTGTGAAAACTGTTACTTCAGAGCTTGACGGTGCGAAAGAATCACTGAATAAAGTAGTAGATGAAGAAAACTCTCTTAGAACCTTGGTAGAAACTCTGAAGGTGGAACTAGAGAATGTAAAGAAAGAACATGCTGAATTGAAGGAAAAAGAGTCCGAAACCGAATCCATCGTTGGGAATCTACATGTCAAACTCCGCAAAAGCAAGGCTGAGCTTGAAGCCTGCTCTGCTGAAGAATCTAAGGTTAGAGGTGCATCCGAGGAAATGATCTTGACACTGAGCCAGCTGACATCGGAAACTGAGGAAGCACGGCGGGAAGCAGAAGAGATGATGAACAAAACAGCTGAGTTAAAGAAGGAAGCCGAAGCTACCAAGCTTGCATTAGAAGATGCAGAGAAGAAGCTTAAAGAAGCAATGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAAGCTAGTGCTCTCGAGCAGATTACAGTGCTAACAGAAAGAACAAGTGCTGCACGTGCATCAACGTCATCAGAATCTGGTGCTGCGATTACAATCTCAACAGAAGAGTTCGAGTCACTAAATCGGAAAGTCGAGGAGTCGGATAAATTAGCAGACATGAAAGTAGATGCGGCCAAAGCACAGGTTGAAGCTGTGAAAGCTAGTGAAAATGAAATTTTGAAAAAGTTGGAAGCAACTCAAAAGGAAATTGAGGATATGAAGACTGCGACACAAGAGGCCTTGAAAAAGGCCGAGATGGCTGAAGCGGCAAAGAGGGCAGTAGAGAGTGAGCTTCGAAGGTGGCGAGAGCGGGAACAGAAAAAGGCAGCCGAAGCTGCAGCTCGGATACTGGCCGAAACACAGATATCATATTCACCAGAATCATCTCCTCAGCATTATAGGATTCAAAGGCAGAATGTCCCTCCTCCTCATACAACAGTGGAGGTGAGGAAGTTAGAAAAAGAGAAGGTTTCGGGTTCGAAGAAAACAGTTTTGCCTAATATTGGTGGTATCTTTCATAGGAAGAAAAGCAATGTTGATGCTGGATCTGTTTCTTATTTGCCTGGTGAGAATCCTGTATAG 1971 0.4318 MVAKIRQSATDSPTPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGERPILKKPKAYSAERVLAKETQLHVAEKELNKLREQVKNAETTKAQALVELERAQRTVDDLTQKLKLITESRELAIKATEAAKTQAKQKYGDSDGVNGTWKEELETAVKRYASIMTELDAAKQDLRKTRQEYDSSSGARVSAVKQTEEAENAMKENTERVSELYKEILSVKESIEQEKLASVEAQRQQALTLSEKDALRQSYKATLEQSKKKLLALKKEFNPELTKNLEAQLAETMSEIATLQSEMENKRSSDLDSVKTVTSELDGAKESLNKVVDEENSLRTLVETLKVELENVKKEHAELKEKESETESIVGNLHVKLRKSKAELEACSAEESKVRGASEEMILTLSQLTSETEEARREAEEMMNKTAELKKEAEATKLALEDAEKKLKEAMEEAEAAKAAEASALEQITVLTERTSAARASTSSESGAAITISTEEFESLNRKVEESDKLADMKVDAAKAQVEAVKASENEILKKLEATQKEIEDMKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAAARILAETQISYSPESSPQHYRIQRQNVPPPHTTVEVRKLEKEKVSGSKKTVLPNIGGIFHRKKSNVDAGSVSYLPGENPV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01096 656 Coils Coil 395 457 - -
Trre5g01096 656 Coils Coil 325 359 - -
Trre5g01096 656 Coils Coil 509 567 - -
Trre5g01096 656 Coils Coil 246 266 - -
Trre5g01096 656 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 22 611 - -
Trre5g01096 656 MobiDBLite consensus disorder prediction 586 606 - -
Trre5g01096 656 Pfam Weak chloroplast movement under blue light 23 570 IPR008545 -
Trre5g01096 656 Coils Coil 151 178 - -
Trre5g01096 656 MobiDBLite consensus disorder prediction 176 203 - -
Trre5g01096 656 Coils Coil 272 299 - -
Trre5g01096 656 Coils Coil 193 213 - -
Trre5g01096 656 MobiDBLite consensus disorder prediction 586 608 - -
Trre5g01096 656 MobiDBLite consensus disorder prediction 1 30 - -
Trre5g01096 656 Coils Coil 63 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01096 Trre-Chr5 7675969 7679258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01096 - - gmx:100794569 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01096 5 7675969 7679258 Trre9g05217 9 57238463 57241163 PCT