Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05135 ATGACAATAATAACAACAACAACATCAGAAACAATCTCAGCAGCTCTCAAACTTGTCGACAGCAAAAAACAAAATCTCAAAAAAGCATACGATGATCTTCAATCTCACTCTTCCAATTTCTCTTCTTTCCCTCTTTTATGGCCAGACCTCGATTCTCACTTCACCAAAATCCAAACCACTCTTTCTCAACGCTTACTTCATCTTCAATCCCTAGAATCACAGTTTCAACAAAATCACAACGACCCATTAACTTCTCCTTCAAAATTACCCGACCCAAAACCCAAAAATTCAAACTTTTCATCAATCCCTAATGACCCATCTTCTTCTTCTATCCCAAAATCCTCCACAAGTCACTTGGAAGCATTGATTTCATTCTGCAAGAACAATGATGGAAAAGGGTTAAGGGATTTCATTAAGGAGAATTTTAATGATAGGGTTGTGATTAAAGATGAGCTTCAGGTTGCGTTTAAATCTGCATCTAATCCTGCAAATATGGTTCTTGATGCAATTGATGGTCTTTTAGGTGCAAATGTAATGGTAGATGTAAAAGAATCACGTTTGATTAAGAGAAGTTGTAATTTTTTGTTTCAACAGTTAAGGTTTTTTTCTCCTTATGTTAGTTCTGATGTTAGGAAGAAAGCTGAAAAGTTGTTTAATGAGTGGAAGGTTAACTTGGTGAATGATGTTCATGAACCAAGTTGTCATGAACCAAGTTGGGATATGGCTTTCTTGCAATTTGCTGCTGTCTTTGGTTTTCTTGTTGATTTGAATGTTGGCGAGCTTGCTGCTCATTGTGCTACTGCTGCTGCTGCTCACAATGAGATTCCTGAGCTGTGCCAGATTATTGCTTTGTCAGATAAAGTTGAAGGTGTTATTCAGAAACTTATTGAAAAGGGCAAACATGTTTTGGCTGTCAAGTTTATTTTTCACTTCAAACTTACTGATAAGATGCCACCTGTTCCCATTTTGAAAGCTTTTGTGAATGATTCAGAGCAAATTGCGAAAAGACTCGCCTCCGAGGGAAAGTCGGTGAGAGGGATAAAATCTAGACAAATTCATTCATTGAAATTAGTGATTAAGGTTATTGAGACTTATAACCTTGATTCTGAGTTTCCGCGTGCAAGCCTTGAAAAGCGTATAGATGAATTGAACAAGCAGCCCTGGGTAGATGTAAAACCCGCTGCACCAGCTTTTGCTGCGAAGCCTCTTCAACATCAGCAACAACAACTAAGCGGGCTCATGCGTCCTCTAACATCTACTCCATTCGGTCCTGCACCTGTCCTTAATAATGTTGGCAGTGCCAATTCAACCATACACCAGTACCAACAACAACCATTACCTCGTTTCCAGTCAACAAATCTTTACACGAGCATGCCGCCAACCATGTCGTATGGCATGAAGGCACCGACTCCAACTGTCTCCTCATATACAGGTCCCTCAACTAGACCTTATGGTGGTGTCCCAATGGCTCCTAGTAGCAACCTCAACCAAGTTGGTTCTCAGCCGAATTCGTCACAGCCACAAGTGTTTTCTGGTTATCATGCCCCAATGGCTACTAGTGGTAACCTTGATCAAGTTGGTTCTCATCCGAATGCTTCAGCTCCACAAGTTATGCCTGGTTATTATGCCCCAACGGGTCCAAGTGCCAACCTCCATCAACGTGGTTCTCATCCGAATCCGTCTGAGCCACAACCACAAGTTATGCCTGGTTATTATGGTAGACCTCCGGCTTCTGGTGTCTTTGGTCTGCAACACTATTACGGAACATCTTATCCTCAATAG 1782 0.4113 MTIITTTTSETISAALKLVDSKKQNLKKAYDDLQSHSSNFSSFPLLWPDLDSHFTKIQTTLSQRLLHLQSLESQFQQNHNDPLTSPSKLPDPKPKNSNFSSIPNDPSSSSIPKSSTSHLEALISFCKNNDGKGLRDFIKENFNDRVVIKDELQVAFKSASNPANMVLDAIDGLLGANVMVDVKESRLIKRSCNFLFQQLRFFSPYVSSDVRKKAEKLFNEWKVNLVNDVHEPSCHEPSWDMAFLQFAAVFGFLVDLNVGELAAHCATAAAAHNEIPELCQIIALSDKVEGVIQKLIEKGKHVLAVKFIFHFKLTDKMPPVPILKAFVNDSEQIAKRLASEGKSVRGIKSRQIHSLKLVIKVIETYNLDSEFPRASLEKRIDELNKQPWVDVKPAAPAFAAKPLQHQQQQLSGLMRPLTSTPFGPAPVLNNVGSANSTIHQYQQQPLPRFQSTNLYTSMPPTMSYGMKAPTPTVSSYTGPSTRPYGGVPMAPSSNLNQVGSQPNSSQPQVFSGYHAPMATSGNLDQVGSHPNASAPQVMPGYYAPTGPSANLHQRGSHPNPSEPQPQVMPGYYGRPPASGVFGLQHYYGTSYPQ 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05135 593 Pfam Frigida-like protein 118 386 IPR012474 -
Trre9g05135 593 MobiDBLite consensus disorder prediction 490 515 - -
Trre9g05135 593 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 107 402 - -
Trre9g05135 593 MobiDBLite consensus disorder prediction 489 574 - -
Trre9g05135 593 MobiDBLite consensus disorder prediction 76 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05135 Trre-Chr9 56773787 56776704 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05135 - - tpra:123921905 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01197 5 8483606 8487918 Trre9g05135 9 56773787 56776704 PCT