Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05052 ATGTTAATGCACGGAACTTCCTATCTTTCAAAATCAATTGGAATATTCATTGCAGAATGCAATAGAAAGAGTGATATCTCATTAGGTTTCATCTCTGTGATTATATCTGATAAGGGTCTTGACTTTGTCAAAGATATTCTAATAAACCAAACTATTGAATCTATAGTTCTTTCTCAGCTACCACAAATTGAGAAATCTGTTCAAGTTCCTCTTGTTGGAAAAGCTCATGTGGTTCTTTCTGAGATCACAATCAAAGATATTCAAGTAAGTTCTTCATATGTTGAAATTGGTGATAGTGGCATTAATGTTGTTGTTTCTGGTGCTACTGCTAATTTGAACTTGAATTGGAGATACACTTATAGTGGAACTACCACTGTTAAGGGAATGATAGGAATAAATGTTGTGCACAAGTTGGTTAGTTTGATCAAAATTGGTTCCAGAATTGGTGATAAAAAACACAAGTTAACCCAAAAAACCAATCTGATGATCCCAATTCGAAATACCTAA 507 0.3333 MLMHGTSYLSKSIGIFIAECNRKSDISLGFISVIISDKGLDFVKDILINQTIESIVLSQLPQIEKSVQVPLVGKAHVVLSEITIKDIQVSSSYVEIGDSGINVVVSGATANLNLNWRYTYSGTTTVKGMIGINVVHKLVSLIKIGSRIGDKKHKLTQKTNLMIPIRNT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05052 168 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 32 135 IPR017943 GO:0008289
Trre9g05052 168 Gene3D - 28 156 - -
Trre9g05052 168 PANTHER OS06G0309200 PROTEIN 24 123 IPR045897 -
Trre9g05052 168 Pfam LBP / BPI / CETP family, N-terminal domain 39 134 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05052 Trre-Chr9 56257113 56258488 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05052 K05399 - gmx:100807666 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g05052 9 56257113 56258488 Trre9g05052 9 56257113 56258488 ECH
Trre5g01272 5 8883419 8887736 Trre9g05052 9 56257113 56258488 PCT