Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04984 ATGGAATCACCTACCTTCGTTTCAAAAGCAAGGACAGCCTTTCATTCCGCTGCTGCAAAAGCGGAACGTGTTCTTCTTGACTTCAAATCAGATCGAGATCAAGATAAACAATCTCCTAATAGCTTCACAAGGCAATCTGGAATCGAATCTCCAAGCAGCAGCGAGAACGAATCTAAGCCACCAAAGCATCATATAAAGTGGAGGCCGAAGAATATAGGGATAAAGCAAGATTGGCAAGAGAAGTTTAGGAATATTCGGATAGGGAGAAAAGAAGTTGAAGCTGAAGATACAGATAAAATCGGGGATGCAAACATGGCAATTCCATTTTATGATGAAAATTTGTATATTTTGAATGTGAAGAATGATCTTGAGGCTAAGGCTTCAGAAGTAATTCCATCTGTAGAAGGCCTAAATGCTGCGACTAAAGATCCCATTCCTGCATCATCTGTGCTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGTAAGACAAAGTCCATGAAAGATTTTATATCTTCATCAGGAAGTCCTTCACCTGCCAGAGAGAGGGGCTTAAGTCTCTCTGCAGTTAAGGCTTTAGTGTTGCGAGAAAAGGAGGATAAACTTACCTCTGAGTTTAGTAGGGACGAGAAAGTTGTGCTTTTGATCAATGCTCTTTTCAATCCAGAGGGAGATTTCCTTAGAAGGAAGATCGATTCCAATCAAGAGGAAAATGAGATAACATCTCTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGTCTTGTTGTAAAGTTGGCCGAAATTGTTGGAAACTACAAGGCCCTCCGAAAAATGGCTCTGTTCTGGTGCAGCGTTGTTGCTGAACTGAGAAAATTTTGGTATGAAGAACAATATTTACCTGGAGTCCCTCAGAATGAGATTCCAGACCTGAAAACATGTCTTCTGAATCAACACTTTCAAGTAATTAATTGTTGTATTTCTCGGAAGAGGCTCCGTATCATTGCGACTGAAGCTCTAGACTCTATGGTGATGCAAGCTAGTTCAAGCATTAAAGAATCAGCCAATGATGATGATGGAGCTCCTGCAAGCCCTGTTTTATATGCCAGATTAAATACCGGAGAGCGTGTTCTTCGACTTGGTGCTAATTGCCCCTCTGGTGATTTGACTTTATTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACCCAGGAAGGACCTTTGCTTACAGAAGATTTAATCAGAGAAACAGAAGAGTTTGTGCTGCGGACTGGGAGTGTTGGCGCTGGCTGCTCGCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCACCTCCTGATTGGACAGACAATGAGGCTGGTATCGAGGACAGTGATGTTTTTGACAGTGGCGAATCATTGTCGGCCAGAGGCCAACTAAGTCGGCGTATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTACCAGCTGTTAAGCAGGCACCTCTCTTCGATGAGGATTTGGCAGTAGAGGGCATCCTCAATACATTTGAGGACATCCATCCTTTCGAGCTTTTTGGGCAGTTGTTTGTCTCTTTACTTGGGTTAGGATTTGCGATTGCTGAACCTCTGCTGTCTAGTAACAAGGACTTCTCAAAGTTGTTTTATGACTGCAAGGAGTACATAGTTACTACATGCCAAAGCACCAAATGGAGTGAGAAAGTTGATGACCTTGTCCAGGTATATGAAACAGTGGAGACAATGTTAATGAATCCTGAAGAAGCATTGAAGATGATGAAACAAACAGAAGAATCAACGACGGTTACTGATGAACCAATGAGCCGGTTGAAGAGGCTTAGCCTTATCTTCAGCGGCAAAGATAAAGTATTGAAAAAGACTTTGTCAAAAGATCAAATAAACGATGAAGACAAGTCAACACCACGACAATCTTTCTCAAGTTTCTTCGAAAACAAGTCATCTTTATTTTCTAAGAAGCCTCCTAGGTCTGGTTCCCCGTCCCAGTCTCCTTCAGAGAAACCTCCTAGGTCTGGATCCCCGTCCCAGTCTCCTTCAGAGAAACCTCCTATCGAAACCGAGTGGACAATTGTTTAA 2130 0.4282 MESPTFVSKARTAFHSAAAKAERVLLDFKSDRDQDKQSPNSFTRQSGIESPSSSENESKPPKHHIKWRPKNIGIKQDWQEKFRNIRIGRKEVEAEDTDKIGDANMAIPFYDENLYILNVKNDLEAKASEVIPSVEGLNAATKDPIPASSVLKQLAIAVEAGSKTKSMKDFISSSGSPSPARERGLSLSAVKALVLREKEDKLTSEFSRDEKVVLLINALFNPEGDFLRRKIDSNQEENEITSLPRDIHGAPPESLVVKLAEIVGNYKALRKMALFWCSVVAELRKFWYEEQYLPGVPQNEIPDLKTCLLNQHFQVINCCISRKRLRIIATEALDSMVMQASSSIKESANDDDGAPASPVLYARLNTGERVLRLGANCPSGDLTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEAGIEDSDVFDSGESLSARGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNTFEDIHPFELFGQLFVSLLGLGFAIAEPLLSSNKDFSKLFYDCKEYIVTTCQSTKWSEKVDDLVQVYETVETMLMNPEEALKMMKQTEESTTVTDEPMSRLKRLSLIFSGKDKVLKKTLSKDQINDEDKSTPRQSFSSFFENKSSLFSKKPPRSGSPSQSPSEKPPRSGSPSQSPSEKPPIETEWTIV 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04984 709 MobiDBLite consensus disorder prediction 651 701 - -
Trre9g04984 709 MobiDBLite consensus disorder prediction 643 709 - -
Trre9g04984 709 MobiDBLite consensus disorder prediction 28 65 - -
Trre9g04984 709 MobiDBLite consensus disorder prediction 39 55 - -
Trre9g04984 709 Pfam Rab3 GTPase-activating protein catalytic subunit 371 524 IPR026147 -
Trre9g04984 709 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 64 679 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04984 Trre-Chr9 55797304 55803530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04984 K18270 - gmx:100818643 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04984 9 55797304 55803530 Trre9g04984 9 55797304 55803530 ECH
Trre5g01344 5 9429605 9434727 Trre9g04984 9 55797304 55803530 PCT