Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04934 ATGGAACAACTCAAATTCATTCTTATTCTTCTAATCTTTCTTTCTTCAACCGTTACTTCTGAATATGTTCGTCCTTTACCTCGAAAAACCTTAAACATTCCATGGCCATGGGATTCTAAATCCAAAACTCACTCTTATCAACCTCAACAGGTACACATTTCTTTGGCAGGAGACAAGCACATGAGAATTACATGGATAACTGATGACAAACATTCACCTTCATTTGTAGAATATGGAACATTACCCGGTAGATATGATTCAATATCCGAAGGAGAATACACCTCTTATAATTATCTGTTATATAGTTCAGGAAAGATACACCATACTGTTATTGGACCTTTGGAATACAATACCGTGTACTTTTACCGTTGTGGGGGACAAGGTCCTGAGTTTGAGCTCAAAACCCCTCCAGCTCAATTTCCAATCACTTTTGCTGTGGCTGGAGATCTTGGTCAAACTGGTTGGACTAAATCAACATTAGATCACATTGATCGATGTAAATATGATGTTTACCTTCTTCCAGGTGACCTTTCGTATGCCGATTGTATGCAGCATCTTTGGGACTCGTTTGGTAGGTTAGTTGAGCCGCTTGCTAGTGCGAGGCCATGGATGGTAACACAAGGAAATCACGAAGAGGAGAATATACTATTGTTAACCGATGAGTTTGTGTCCTATAATTCTAGATGGAAAATGCCTTTTAAGGAGAGTGGATCAACTTCAAATCTATATTATTCTTTTGAAGTTGCAGGTGTTCATGTTATCATGCTTGGGTCTTATGCAGATTATGATGAGTACTCGGGACAATATAGATGGTTAAAGGAAGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGCTTCTCGTGTTATTTCATGTTCCGTGGTATAATAGTAACAAAGCTCATCAAGGTGCAGGGGATAATATGATGGCAGCCATGGAACCATTGCTTTATGCTGCTAGTGTTGATTTAGTTCTTGCTGGTCATGTTCATGCTTATGAACGTTCGAAACGTGTGTATAATGGAAGATTGGATCCTTGTGGTGCTGTCCATATAACTATTGGTGATGGTGGAAACAGAGAAGGCTTAGCTCATAGGTACATAAATCCACAGCCACAGTGGTCGGAATTCCGCGAGGCCAGTTTTGGTCATGGTGAGCTGAAGGTTATAAACTCTAGTCATGCCTTTTGGAGTTGGCATAGGAATGATAACGACGAGTCAGTAAAAGCTGATGATATCTGGATAACCTCTTTGGTAAGTTCGGGGTGTATTGATCAGAACAGACACGAGCTCAGGAGTATGCTTGCGACACCGTAA 1317 0.4062 MEQLKFILILLIFLSSTVTSEYVRPLPRKTLNIPWPWDSKSKTHSYQPQQVHISLAGDKHMRITWITDDKHSPSFVEYGTLPGRYDSISEGEYTSYNYLLYSSGKIHHTVIGPLEYNTVYFYRCGGQGPEFELKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDRCKYDVYLLPGDLSYADCMQHLWDSFGRLVEPLASARPWMVTQGNHEEENILLLTDEFVSYNSRWKMPFKESGSTSNLYYSFEVAGVHVIMLGSYADYDEYSGQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDNMMAAMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPQWSEFREASFGHGELKVINSSHAFWSWHRNDNDESVKADDIWITSLVSSGCIDQNRHELRSMLATP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04934 438 Pfam Iron/zinc purple acid phosphatase-like protein C 349 407 IPR025733 -
Trre9g04934 438 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 137 IPR008963 GO:0003993|GO:0046872
Trre9g04934 438 Pfam Purple acid Phosphatase, N-terminal domain 48 128 IPR015914 GO:0003993|GO:0046872
Trre9g04934 438 SUPERFAMILY Metallo-dependent phosphatases 141 405 IPR029052 -
Trre9g04934 438 Gene3D - 47 138 - -
Trre9g04934 438 PANTHER ACID PHOSPHATASE RELATED 8 416 IPR039331 GO:0003993
Trre9g04934 438 Pfam Calcineurin-like phosphoesterase 143 333 IPR004843 GO:0016787
Trre9g04934 438 CDD MPP_PAPs 139 417 IPR041792 -
Trre9g04934 438 Gene3D - 139 425 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04934 Trre-Chr9 55514839 55517604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04934 47 428 Miscellaneous Gene Families AT2G03450 25.658 3.63e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04934 K22390 - gmx:100787977 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04934 9 55514839 55517604 Trre9g04934 9 55514839 55517604 ECH
Trre5g01393 5 9812728 9815624 Trre9g04934 9 55514839 55517604 PCT