Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01393 ATGAAACTCAAACTCATTCTAACAGTTTTACTGATTCTGTCAGTAACTTCCACTGCTGATGATTACATTCGTCCTAAGCCTCGAAAAACATTACATCTTCCATGGGATTCAAAACCCTCTTCTTATCCTCAGCAGGTACACATTTCTTTGGCAGGAGACAAACACATGAGAATTACCTGGATTACTGATGACAAATCCGCACCTTCAGTTGTCGAATATGGAACATTGCCAGGGAAATATAACTCTGTAGCCGAAGGAGAGACAACCTCTTACAGTTACATTTTCTATAGCTCAGGAAAGATACATCATACTGTAATCGGCCCTTTAGAGCCGAATTCTGTTTACTTTTACCGATGCGGCGGACAAGGTCCTGAGTTCCAGCTCAAAACACCTCCAGCTCAATTTCCAATTACATTTGCTGTGGCCGGAGATCTTGGTCAAACCGGTTGGACTAAATCAACATTAGATCACATCGACCAATGCAAATATGATGTTAACCTGATTCCTGGTGACCTTTCGTATGCCGATTATATTCAGCATCGTTGGGACTCGTTCGGTAGGCTTGTGGAGCCACTTGCTAGTGCTAAACCATTTATGGTAACACAAGGGAACCATGAAGTGGAGCACATACCTTTGTTAAAAGATGGATTTTTATCGTATAATTCTAGATGGAAAATGCCGTTTGAGGAAAGTGGATCGAGTTCGAATCTCTATTATTCTTTTGAAGTTGCTGGTGCTCATATTGTCATGCTTGGTTCCTATGATGATTATGATGTGTACTCAGAACAATATAAATGGCTAAAGTCAGATCTGTCTAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTTCATGTCCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGGCATGATGGAAGCCATGGAGCCATTGCTTAATGCTGCTAGCGCCGATTTAGTTTTTGCCGGTCATGTGCACGCATACGAACGCTCGAAACGTGTAAATAATGGAAAATTGGATCCTTGTGGTGCTGTTCATATAACAATCGGCGATGGAGGGAACAAAGAAGGCCTAGCTCAGAAGTATATAGATCCACAACCGATATGGTCAGAATTTCGTGAAGCGAGTTTCGGTCATGGTGAGCTAAAGATTGTAAACTCGACGCATGCGTTCTGGAGTTGGCACCGGAATGACGATGACGAACCAGTAAAATCTGATGATATTTGGATAACTTCTTTAGTCAGCACAGGATGTGTTGATCAGAAGAAAACTGAACTTGAGCATGCACTTATGACACCCTAA 1302 0.4209 MKLKLILTVLLILSVTSTADDYIRPKPRKTLHLPWDSKPSSYPQQVHISLAGDKHMRITWITDDKSAPSVVEYGTLPGKYNSVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGQGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQHRWDSFGRLVEPLASAKPFMVTQGNHEVEHIPLLKDGFLSYNSRWKMPFEESGSSSNLYYSFEVAGAHIVMLGSYDDYDVYSEQYKWLKSDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGGMMEAMEPLLNAASADLVFAGHVHAYERSKRVNNGKLDPCGAVHITIGDGGNKEGLAQKYIDPQPIWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVSTGCVDQKKTELEHALMTP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01393 433 CDD MPP_PAPs 134 412 IPR041792 -
Trre5g01393 433 Pfam Iron/zinc purple acid phosphatase-like protein C 344 400 IPR025733 -
Trre5g01393 433 PANTHER ACID PHOSPHATASE RELATED 9 411 IPR039331 GO:0003993
Trre5g01393 433 SUPERFAMILY Metallo-dependent phosphatases 136 403 IPR029052 -
Trre5g01393 433 Pfam Calcineurin-like phosphoesterase 138 328 IPR004843 GO:0016787
Trre5g01393 433 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 132 IPR008963 GO:0003993|GO:0046872
Trre5g01393 433 Gene3D - 42 133 - -
Trre5g01393 433 Gene3D - 134 421 IPR029052 -
Trre5g01393 433 Pfam Purple acid Phosphatase, N-terminal domain 43 123 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01393 Trre-Chr5 9812728 9815624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01393 43 423 Miscellaneous Gene Families AT2G03450 26.154 1.16e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01393 K22390 - gmx:100782338 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01393 5 9812728 9815624 Trre5g01393 5 9812728 9815624 ECH
Trre5g01393 5 9812728 9815624 Trre9g04934 9 55514839 55517604 PCT