Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04431 ATGGTTTCGGTTGATAATAACGGTAAAGATGTAATTGAGGAATGTAACAATAATGGAAGTAAAGCGGCAGAGTTTACTTCCATAGATATTTCGAGTTCTAGAAGAACGTTGGTGACTGGTGAAAAACCTGAGAGAAAGTTCCCGGGCACGTTGAGTTCTGTTCCTAATAGGATCAACTTCTTGAAATTTGGTTCTGCGTCTGCTAAGTTCAGGCGGCTTGCTACTCAGATGGATCTGGCTTCACAATCTGTTCCTTCTCCGAGTTCACGTAGTTTAAGAGAACGCTTCAGTGGCATGTTTACTAAGAAACTCGATTGGGATTCGATTAAGAAGATGGCGATGGAATGGATTAGGAACCCAATGAACATGGCCCTTTTTGCGTGGATCTTAGTTGTTGCTATTTCCGGTGCAATCTTGTTCCTTGTCATGACTGGCATGTTGAATGCTGCGATTCCGAAGAAAGAGACAAGGAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCGCTGTTTACGCTGATGTGTTTGTATCAGCATCCGAAGAGATTCTACCACCTTGTACTTCTGTGTAGATGGAGTCCAACAGATATCATCAAACTTAGAAAGGAGTATTGCAAAAATGGAACTTATAAGCCTCATGAATGGACACACATGATGGTAGTGGTAATTCTCGGTCATGTGAACTGTTTCGCTCAATATGCACTTTGCGGTCTAAACATAGGGTATAAAAGATCTCAGCGCCCAGCAATCGGAGTTGGAATATGTATATCTTTTGCGATCGGTGCACCTGCAATTGCTGGTCTATATACCATTCTTAGTCCACTAGGTAAAGATTATGATTCTGGTTCGGACGAAGAATCACAGGTTCAAATTTCTGCTGCTCAAAAGCAAGATCAGATGAGAATAAAATCATTTCAGAGGAAATATTCATTTGCATCAAAAGATCAACGAAGGACCGTCGTAAGTAGACCACAATGGAGTGGAGGAATACTTGACATTTGGGATGACATATCTCAAGCATATCTATCACTTTTCTGTACTTTTTGCGTCTTCGGTTGGAATATGGAGAGACTTGGCTTTGGAAACATGCAAGCTTTAGTAGGTGCTGGAATCGTTCTATGTTTTTTCGGTATGCTCTATGGTGGATTTTGGAGAATCCAAATGAGAAAGAGGTACAATTTGCCTACTTATGACTTCTGTTGCGGCAAACCTACAGTTTCTGATTGCGCACTTTGGCTATGTTGTTGTTGGTGTTCTCTTGCTCAAGAGGTACGAACGGGGGATGCCTATCATATTGTAGATGATAAATTCTTCAGCAAAGAAATTAACACTGCTGACCAACCACCGATTTCACCTTTGAATCGCGAAGGTGTTGCATTGAATAAATCTGGCACAAGTTCCCCTCTTGGTGTCAATTCTTCTCCTTCTAGATTCAAGCCGTCGAGTCCTCTAAGTTCTAGCAGTTTCTTTACAGAATATCATAGTTCAGATGGTCCACTATCTAGTGTAAAAGAAGAGGTTTCTGAAAAAGATAAAGATGTAACGATGAATCCACCAACTCCACCATTGATACAAAGAGAATCTCCTTAG 1593 0.408 MVSVDNNGKDVIEECNNNGSKAAEFTSIDISSSRRTLVTGEKPERKFPGTLSSVPNRINFLKFGSASAKFRRLATQMDLASQSVPSPSSRSLRERFSGMFTKKLDWDSIKKMAMEWIRNPMNMALFAWILVVAISGAILFLVMTGMLNAAIPKKETRNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWSPTDIIKLRKEYCKNGTYKPHEWTHMMVVVILGHVNCFAQYALCGLNIGYKRSQRPAIGVGICISFAIGAPAIAGLYTILSPLGKDYDSGSDEESQVQISAAQKQDQMRIKSFQRKYSFASKDQRRTVVSRPQWSGGILDIWDDISQAYLSLFCTFCVFGWNMERLGFGNMQALVGAGIVLCFFGMLYGGFWRIQMRKRYNLPTYDFCCGKPTVSDCALWLCCCWCSLAQEVRTGDAYHIVDDKFFSKEINTADQPPISPLNREGVALNKSGTSSPLGVNSSPSRFKPSSPLSSSSFFTEYHSSDGPLSSVKEEVSEKDKDVTMNPPTPPLIQRESP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04431 530 Pfam PLAC8 family 327 426 IPR006461 -
Trre9g04431 530 NCBIfam uncharacterized Cys-rich domain 326 427 IPR006461 -
Trre9g04431 530 MobiDBLite consensus disorder prediction 465 530 - -
Trre9g04431 530 Pfam Protein of unknown function (DUF2985) 115 193 IPR021369 -
Trre9g04431 530 MobiDBLite consensus disorder prediction 465 503 - -
Trre9g04431 530 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04431 Trre-Chr9 51952094 51953779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04431 - - gmx:100795088 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02156 5 16190341 16191813 Trre9g04431 9 51952094 51953779 ECH
Trre9g04431 9 51952094 51953779 Trre9g04431 9 51952094 51953779 ECH
Trre5g02156 5 16190341 16191813 Trre9g04431 9 51952094 51953779 PCT