Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04405 ATGCCTTCACCTATTCAGCTTCAAAGATTCAACACTAGCACCGAAACCGCCTCCGTTAATTTCCTAGCTAACGGCGTTAACTGTCCAAAGCAAATCCAACAAACGCGTCGTTACGCGCTTTCTACGGAAAAAATAACCGTTTCCGATACGGTTGCGAATCACCACACACACCTGGTGGGACCACACCAGTGCTACTCCGTCGTGATCCAAAAAATCAACGCCTCCGTTTCAACCGTATGGTCCGTCGTTCGACGATTTGATAATCCACAAGGATACAAAAACTTTGTGAAAAGTTGCAACGTCGTCGCCGGCGATGGCATTCGTGTCGGTGCTCTCCGTGAAGTCCGGTTGGTTTCCGGTTTACCTGCTGTTTCAAGTACGGAACGGTTAGATATACTTGATGAAGAACGCCACGTCATCAGTTTCAGTGTTGTTGGTGGTGTTCATCGGCTTAGGAATTATCGATCGGTGACGACGCTTCACGGTGATGGTAATGGAGGAACGGTTGTTATTGAATCGTATGTTGTTGATGTACCGTGCGGTAACACAAAGGAAGAAACGTGTAGTTTTGTTGATACCATTGTTCGGTGTAATTTACAATCACTAGCTCAGATCGCCGAAAAACTCTGA 630 0.4651 MPSPIQLQRFNTSTETASVNFLANGVNCPKQIQQTRRYALSTEKITVSDTVANHHTHLVGPHQCYSVVIQKINASVSTVWSVVRRFDNPQGYKNFVKSCNVVAGDGIRVGALREVRLVSGLPAVSSTERLDILDEERHVISFSVVGGVHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPCGNTKEETCSFVDTIVRCNLQSLAQIAEKL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04405 209 Pfam Polyketide cyclase / dehydrase and lipid transport 70 207 IPR019587 -
Trre9g04405 209 PANTHER - 63 206 - -
Trre9g04405 209 CDD PYR_PYL_RCAR_like 64 207 - -
Trre9g04405 209 FunFam Abscisic acid receptor PYL4 25 209 - -
Trre9g04405 209 SUPERFAMILY Bet v1-like 67 206 - -
Trre9g04405 209 Gene3D - 27 209 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04405 Trre-Chr9 51772439 51773068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04405 K14496 - gmx:100798803 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02135 5 15982619 15983681 Trre9g04405 9 51772439 51773068 ECH
Trre9g04405 9 51772439 51773068 Trre9g04405 9 51772439 51773068 ECH
Trre5g02135 5 15982619 15983681 Trre9g04405 9 51772439 51773068 PCT