Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02135 ATGCCTTCTTCTTCTTCTTTCTCTTCTCTGAAGCTCCAGAGATTCAATCCTACAACTGATGCAACAACCTCAGCAGCTATAGCCAACGGTGTAAACTGCCCTAGACAACAACAAACACCACCACCCACGGCGGCGCGTCGTCTTATAATACCATTTCCAGTCTCTCTTTCTTCAAACGACAGTTTAGCACTTCACCACGCGCATATGGTGACACACAACCAGTGTTGCTCCGTCGTAACTCAAACCATCACCGCTCCCGTCTCCGCCGTATGGTCCGTCGTTCGACGGTTCGACAACCCACAAGGATACAAAAACTTCATCAAAAGTTGCCACGTCATCACTGGTGAAAACATTAACGTCGGTTCAGTTCGTGAGGTTCGCGTGGTTTCCGGACTACCAGCTGAGTCGAGTAGAGAAAGGCTGGAGATTCTTGACGATGAACGCCACGTCATCAGTTTCAGTGTTGTTGGTGGGGACCACCGTTTGAGAAACTATCGGTCGGTGACGACACTTCATTCTGTTGAAGGAAATAGGACACTTGTCGTTGAATCATACGTCGTTGATGTACCGCAAGATACTCGTTTCATTTTCATGATTTGA 600 0.4783 MPSSSSFSSLKLQRFNPTTDATTSAAIANGVNCPRQQQTPPPTAARRLIIPFPVSLSSNDSLALHHAHMVTHNQCCSVVTQTITAPVSAVWSVVRRFDNPQGYKNFIKSCHVITGENINVGSVREVRVVSGLPAESSRERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHSVEGNRTLVVESYVVDVPQDTRFIFMI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02135 199 PANTHER - 72 193 - -
Trre5g02135 199 SUPERFAMILY Bet v1-like 74 193 - -
Trre5g02135 199 CDD PYR_PYL_RCAR_like 75 190 - -
Trre5g02135 199 Gene3D - 54 197 IPR023393 -
Trre5g02135 199 Pfam Polyketide cyclase / dehydrase and lipid transport 75 189 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02135 Trre-Chr5 15982619 15983681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02135 K14496 - gmx:121174020 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02135 5 15982619 15983681 Trre9g04405 9 51772439 51773068 ECH
Trre5g02135 5 15982619 15983681 Trre5g02135 5 15982619 15983681 ECH
Trre5g02135 5 15982619 15983681 Trre9g04405 9 51772439 51773068 PCT