Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04357 ATGGCTACATTCACCTACAATTACACAATGTTCAAATACTTCAACAGAAAATTCGCTATCTCCGAACAAGCACCACCGTCTGATGTCAAGGAAGCTTTTTCCAATTTCTCCGACGGCGGATCTTCCATTTCCACCGATCAACTTCGACGATTTTTACTTGAACATCAATGCGAACCAGATTGCACTGAAGATGATTCGAAACGGATCATTGAAAATGCTCTGCAATCACGGAAACGAGATCAGGAAAACGGTGATGATGGTGATGGAATTTCAGGTTCCGGAGAGGGACTTACGGTTGAAGAATTTTTTCAGTTTTTGTTTGATGAATTCAATGGTCCCTTGAAAACACAGGTACACCATGACATGAATGCCCCGTTATCACATTATTTCATATATACAGGACACAATTCCTATCTAACTGGGAATCAGCTGAGTAGTGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGCGTCCGAGTAATTGAATTAGATATATGGCCAAATTCAGCTAAAGATGATATCGTTGTAGTTCATGGAAGAACACTTACAACTCCGGTCTCACTAGTCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCGTTACCCTGTCATTATAACTTTAGAAGATCATCTTACACCAGATCTTCAAGCTAAAGTTGCAGAGATGACAACTCAAATATTTGGAGACATGCTCTACTTTCCTCAGACAGATCCTATGACAGAGTTTCCTTCACCAGAATCACTAAAAGATCGAATACTTATATCAACCAAACCACCAAAAGAATATCTTGATTCCAAACAATTTAAGGATACTAGTGACAGTGAAAGGGAAATGAGTGAAGATGGAGGAATGTCACCAGCGCTTAGTGTTGAAGCTGAAGACAAATGCAATGAAAGTGATCTTGATGAGGAAGGTTCGAATCCTCGTGATAAAAAACCAGACCAGCAGAGTGCACCTCAGTACAAACGTTTGATTACAATCCATGCTGGTAAACCCAAAGGAAATATAAGGGATCATCTTAAAATTGCTGGTGATGTTAAGCGCTTGAGCTTGAGTGAGCAGGAACTTGAAAGGGCTTCTGCCGCTTATGGAGCTGATATTGTTAGGTTTACACAGAAGAATATTATTAGGGTGTATCCGAAGGGAACACGTGTCACCTCCTCAAATTACAGGCCCCATATAGGGTGGATGTATGGAGCTCAGATGGTCGCATTTAACATGCAGGGGCATGGAAAATCACTTTGGTATATGCAAGGGATGTTTAGATCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTGATTTTCTTATGGAAAAAGGTTCACACAATGAGTGTTTTGATCCTAAAAGAGCACTTCCTGCGAAAACGACATTGAAGGTTAAAGTATATATGGGAAATGGGTGGAGCTCAGATTTTAGCAAAACACACTTTGATACATTCTCTCCTCCAGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAAAGCTATTAAGAAGACCAAAGTAATTTATGATGATTGGTTTCCAGTTTGGGATGAAGAGTTTGAATTTCCTTTGAGTGTTCCAGAGCTTGCTTTGCTTAGGATAGAAGTTAGAGAGTATGATAAGCATGAAAAGGATGACTTTGGTGGACAAACATGTTTACCTATTCCTGAGCTGAAATCTGGATTCAGAACAGTCCCTTTATATGATCAGAAGGGTGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTTACATGA 1779 0.3957 MATFTYNYTMFKYFNRKFAISEQAPPSDVKEAFSNFSDGGSSISTDQLRRFLLEHQCEPDCTEDDSKRIIENALQSRKRDQENGDDGDGISGSGEGLTVEEFFQFLFDEFNGPLKTQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDIWPNSAKDDIVVVHGRTLTTPVSLVQCLKSIKEYAFVKSRYPVIITLEDHLTPDLQAKVAEMTTQIFGDMLYFPQTDPMTEFPSPESLKDRILISTKPPKEYLDSKQFKDTSDSEREMSEDGGMSPALSVEAEDKCNESDLDEEGSNPRDKKPDQQSAPQYKRLITIHAGKPKGNIRDHLKIAGDVKRLSLSEQELERASAAYGADIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVAFNMQGHGKSLWYMQGMFRSNGGCGYVKKPDFLMEKGSHNECFDPKRALPAKTTLKVKVYMGNGWSSDFSKTHFDTFSPPDFYTKVCIVGVPADKAIKKTKVIYDDWFPVWDEEFEFPLSVPELALLRIEVREYDKHEKDDFGGQTCLPIPELKSGFRTVPLYDQKGEQLKSVKLLMRFQFT 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04357 592 MobiDBLite consensus disorder prediction 270 328 - -
Trre9g04357 592 Gene3D - 23 117 - -
Trre9g04357 592 CDD PI-PLCc_plant 119 431 - -
Trre9g04357 592 SMART C2_3c 464 572 IPR000008 -
Trre9g04357 592 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 591 IPR001192 GO:0035556
Trre9g04357 592 MobiDBLite consensus disorder prediction 308 324 - -
Trre9g04357 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 120 264 - -
Trre9g04357 592 SMART plcy_3 328 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Trre9g04357 592 Pfam Phosphatidylinositol-specific phospholipase C, X domain 122 264 IPR000909 -
Trre9g04357 592 PRINTS Phospholipase C signature 403 421 IPR001192 GO:0035556
Trre9g04357 592 PRINTS Phospholipase C signature 125 143 IPR001192 GO:0035556
Trre9g04357 592 PRINTS Phospholipase C signature 382 403 IPR001192 GO:0035556
Trre9g04357 592 PRINTS Phospholipase C signature 151 171 IPR001192 GO:0035556
Trre9g04357 592 PRINTS Phospholipase C signature 558 568 IPR001192 GO:0035556
Trre9g04357 592 PRINTS Phospholipase C signature 248 265 IPR001192 GO:0035556
Trre9g04357 592 Gene3D C2 domain 460 592 IPR035892 -
Trre9g04357 592 ProSiteProfiles C2 domain profile. 445 574 IPR000008 -
Trre9g04357 592 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 456 IPR017946 GO:0006629|GO:0008081
Trre9g04357 592 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Trre9g04357 592 Pfam C2 domain 464 566 IPR000008 -
Trre9g04357 592 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 464 591 IPR035892 -
Trre9g04357 592 MobiDBLite consensus disorder prediction 270 287 - -
Trre9g04357 592 CDD C2_PLC_like 462 592 - -
Trre9g04357 592 FunFam Phosphoinositide phospholipase C 459 592 - -
Trre9g04357 592 SUPERFAMILY PLC-like phosphodiesterases 120 445 IPR017946 GO:0006629|GO:0008081
Trre9g04357 592 SMART plcx_3 120 264 IPR000909 -
Trre9g04357 592 SUPERFAMILY EF-hand 10 122 IPR011992 -
Trre9g04357 592 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 72 IPR015359 -
Trre9g04357 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04357 Trre-Chr9 51371351 51375632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04357 5 591 Acyl Lipid Metabolism Gene Families AT2G40116 59.217 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04357 K05857 - gmx:100777010 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02088 5 15523970 15527224 Trre9g04357 9 51371351 51375632 ECH
Trre9g04357 9 51371351 51375632 Trre9g04357 9 51371351 51375632 ECH
Trre5g02088 5 15523970 15527224 Trre9g04357 9 51371351 51375632 PCT