Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04352 ATGGGGAGGTTGTTTGTTGTTCATCTTGAAGGGAAGATCTATAGCTGTAAACACTGTAGAACCCCTCTTGCTGTTTTTGAAGATATTGTTTCCAAGGATTTCCAAAGCAGACATGGAAAAGCTTATCTCTTCCGTAAGGTCGCGAATGTTTCTATCGGAGAATCAGAGGACAGGCAGATGATAACTGGGATGCATACTGTGGCTGACATTTTCTGTGTTGGTTGTGGATCGCACGTTGGTTGGACATATGTGACTGCTCATGAGAAAAGCCAGAAGTACAAAGAAGGAAAATCTGTTCTTGAACGGTTCAAAATGTCAGGTCCTGAGGGCAACAACAATTATTGGGTTAGGCATGAAACACATGTTGGTGGAAGTGATGCAGATGATTCTTAA 393 0.4224 MGRLFVVHLEGKIYSCKHCRTPLAVFEDIVSKDFQSRHGKAYLFRKVANVSIGESEDRQMITGMHTVADIFCVGCGSHVGWTYVTAHEKSQKYKEGKSVLERFKMSGPEGNNNYWVRHETHVGGSDADDS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04352 130 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Trre9g04352 130 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Trre9g04352 130 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 105 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04352 Trre-Chr9 51323669 51326388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04352 - - gmx:100780394 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02070 5 15376013 15378276 Trre9g04352 9 51323669 51326388 ECH
Trre9g04352 9 51323669 51326388 Trre9g04352 9 51323669 51326388 ECH
Trre5g02070 5 15376013 15378276 Trre9g04352 9 51323669 51326388 PCT