Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02070 ATGGGGAGGTTGTTTCTCATCAATTTGGAAGGTAGGATCTATACCTGCAAATTTTGTCGCACCCATCTTGCTTTATACGAAGACATCGTTTCCAAGACTTTCCACAGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTCGTGAATGTTTCTCTTGGCGAAACTGAGGAGAGACAGATGATGACTGGGCAACATACCGTGGCTGACATTTTCTGTGTGGGTTGCGGATCAATTGTGGGTTGGAAATATGAGACCGCACATGAAAAAGACCAGAAGTACAAGGAAGGAAAGTCTGTACTTGAACGGTACAAAGTGTCAGGTCCTGATGGTAGCAATTATCGGATCAACAATGGAGCGCATGTTGGGGGAAGCGACGCAGATGATATATAG 390 0.4462 MGRLFLINLEGRIYTCKFCRTHLALYEDIVSKTFHSRHGKAYLFNKVVNVSLGETEERQMMTGQHTVADIFCVGCGSIVGWKYETAHEKDQKYKEGKSVLERYKVSGPDGSNYRINNGAHVGGSDADDI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02070 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Trre5g02070 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Trre5g02070 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 106 IPR004910 -
Trre5g02070 129 MobiDBLite consensus disorder prediction 106 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02070 Trre-Chr5 15376013 15378276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02070 - - atri:130804401 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02070 5 15376013 15378276 Trre5g02070 5 15376013 15378276 ECH
Trre5g02070 5 15376013 15378276 Trre9g04352 9 51323669 51326388 ECH
Trre5g02070 5 15376013 15378276 Trre9g04352 9 51323669 51326388 PCT