Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04333 ATGGTTGATTTAGAATGGAAATCAAAGATGCTAAACTCAAACATATCACCAAAATCACCCAAAATTTCCTTACCCTTACCCACTTTACATCTCCCTCTTCCACTTTCACCAAACGACATCACAGCTGCGTCGTTAAATATTTGCACCGCATATGACAACTATCTCCGCCTCCCTCATCTCAAAGCCCACTGGGCCACTACCACCTTCCCTAATTGGGCTAACGAGCCCATCATAAAGCCTGCCTTAACAGCTCTCGAAATCACTTTCCGTTTCATCACAACCATTTTATCAGACCCAAGAACTTACATCAACAAACGCGAATGGGCCCGACGGGCCGAATCACTAGCAAAAGCCCAAATCCACCTCATCGCTATTCTATCTGAAGAAGAACAAAACTCAAACACACGTGGCAAAGCACCGGTAAATGACGTCAGCAATATAAACCAAAACGATTTCAGATGCTATAGTGAACAAAGTTTGCTACCAAAACTCGCCACGTGGCAACAATCTAAGCAAATCGCACAGAGAATTTTTGCCACCGTGGAATCCGAAATGATGACGTGTAGTTACACGTTAGGTTTAGGTGAACCGAATTTTAACGGAAAATCGATTCTCCGTTACGACGACGTTTGTAAACCGAGTTTGATCCATTCCTTAGAAACGACGCCGTTTGATCACGTTTCAAACTACGAGAATCGTAATCTACACGCGATGCATCAGATTTTCGAGTCATGGACACGCGCAGCGCGTGTATTAATGGAGCGCGTGAATGAGGATATAGAGAACAGAGCATTTGAGAAGGCCGCGAGTGCGATCTACGCGGTGGAAAGAATCTGGAAGCTTCTAACAGAAATTGAAGATTTACACATGATGATGGATCCAGAAGATTTTCTGAAACTGAAGAAAAACCTAGGAATGCGATCATGGAACGAAACGGTACCGTTTTGTTTCCGATCAACGGAGTTAGTTACGATAACAAAGATGTGTAGAGATCTGACACAAAAAGTGCCGGAGATATTGGAAGTTGAAGTGGACCCCACCGGTGGTCCCGGAGTAATGGAAGAAGCGATGAAAGTTTATTCGGAGAAGATGAATGGGTTCGAGAAGGTTCATTTGTTGCAAGCGATGCAAGGGATTGAATCAGCGATGAAGAGATTTTTTTATGCGTATAAACAGGTTTTGACGGTTATGATGGGTAGTTCTGAGATAAATTTGGAATCGTTGAATCGGATATTTCTTGAACCGACTTGTTTTCCTAGCTTGGATGCTGCTAAGACTTTTCTTGGGTATTTTTGGGAAAATTACGAAAATAGTACAATTAGTTGGTAA 1329 0.4266 MVDLEWKSKMLNSNISPKSPKISLPLPTLHLPLPLSPNDITAASLNICTAYDNYLRLPHLKAHWATTTFPNWANEPIIKPALTALEITFRFITTILSDPRTYINKREWARRAESLAKAQIHLIAILSEEEQNSNTRGKAPVNDVSNINQNDFRCYSEQSLLPKLATWQQSKQIAQRIFATVESEMMTCSYTLGLGEPNFNGKSILRYDDVCKPSLIHSLETTPFDHVSNYENRNLHAMHQIFESWTRAARVLMERVNEDIENRAFEKAASAIYAVERIWKLLTEIEDLHMMMDPEDFLKLKKNLGMRSWNETVPFCFRSTELVTITKMCRDLTQKVPEILEVEVDPTGGPGVMEEAMKVYSEKMNGFEKVHLLQAMQGIESAMKRFFYAYKQVLTVMMGSSEINLESLNRIFLEPTCFPSLDAAKTFLGYFWENYENSTISW 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04333 442 Pfam Hs1pro-1 N-terminus 1 182 IPR009869 GO:0006952
Trre9g04333 442 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 437 IPR038759 -
Trre9g04333 442 Pfam Hs1pro-1 protein C-terminus 185 434 IPR009743 -
Trre9g04333 442 Gene3D - 206 323 - -
Trre9g04333 442 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 207 428 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04333 Trre-Chr9 51136759 51138087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04333 - - gmx:100778560 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04333 9 51136759 51138087 Trre9g04333 9 51136759 51138087 ECH
Trre5g02056 5 15310419 15311795 Trre9g04333 9 51136759 51138087 PCT