Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04295 ATGTGTCATATGACAGCATGTTCTTTATTCAGCTATATTGCAATTGCTTGGTTCAAAATGGTTCCAATGCAATTCATTCGTTCTAATCTTCAATTTCTCAAAATCGCTACTTTGAGTTTAGTTTTCTGTGTTTCCGTCGTTTTTGGTAATATTTCCCTACGGTATCTTCCTGTGTCGTTTAATCAAGCTGTTGGTGCTACTACTCCTTTTTTCACTGCCGTTTTTGCTTATCTTATGACATTTAAGAAAGAAGCTTTTCTTACTTATCTTGCTCTTGTTCCTGTTGTTACTGGTGTTATCATTGCTAGTGGGGGCGAACCGAGCTTTCATTTGTTTGGATTCATAATATGTGTTGCAGCTACAGCGGCACGAGCCCTAAAAACAGTGTTACAAGGAATTTTACTTTCATCTGAAGGGGAAAAGCTGAATTCTATGAACCTCCTGTTGTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCTGCTGCACTTTATATGGAAGAAAATGTGGTTGGCATCACGTTGGCTCTTGCTAGAGATGATCCGAAGATCATTTGGTACCTTCTATTCAATTCATCCCTTGCATATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACACACCAGTGCTCTCACCCTTCAGGTACTTGGGAATGCAAAAGGAGCTGTAGCAGTTGTAGTTTCAATTCTGATATTTAAAAATCCAGTATCAGTCACTGGAATGATGGGTTATTCACTCACAGTACTCGGAGTTATACTTTATAGCGAAGCCAAAAAGCGAAGCAAGTGA 792 0.3927 MCHMTACSLFSYIAIAWFKMVPMQFIRSNLQFLKIATLSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKKEAFLTYLALVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKTVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPAALYMEENVVGITLALARDDPKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMMGYSLTVLGVILYSEAKKRSK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04295 263 PANTHER SOLUTE CARRIER FAMILY 35 2 260 - -
Trre9g04295 263 Pfam Triose-phosphate Transporter family 3 256 IPR004853 -
Trre9g04295 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 257 - -
Trre9g04295 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 7 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04295 Trre-Chr9 50826320 50829321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04295 1 263 Organic Solute Cotransporters AT3G11320 88.213 1.57e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04295 - - gmx:100806704 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02002 5 14917342 14924030 Trre9g04295 9 50826320 50829321 ECH
Trre9g04295 9 50826320 50829321 Trre9g04295 9 50826320 50829321 ECH
Trre5g02002 5 14917342 14924030 Trre9g04295 9 50826320 50829321 PCT