Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04287 ATGGTTCCTTTAGGTTGGATAGGTGGTGTTGTTGGTTTAATTCTTGCAACTGCTATATCACTTTATGCAAATGCTCTTATTGCTATGCTTCATGAATTTGGTGGAACAAGACATATTAGATACCGTGATCTTGCTGGTTATATTTATGGTAGAAAAGCGTATTCTCTCACATGGACTCTGCAGTATGTCAATCTTTTCATGATAAATACCGGCTACATCATTTTGGCTGGTTCGGCTTTGAAGGCCGTTTATGTTTTACTTAGGGATGATGATCAGATGAAGCTTCCACATTTTATTGCCATAGCTGGACTTGTATGTGCAATGTTTGCCATTTGTATTCCTCATCTTTCAGCTCTTGGAGTTTGGCTTGGATTTTCAACAGTCTTAAGCCTCGCATACATTGTCATCGCACTTGTACTGTCACTAAGAGATGGAATAAAATCACCAGCTCGAGATTACAGTGTTCCGGGGACATCAACAAGTAAAATATTTACAACAATTGGGGCGTCTGCAAATCTTGTGTTTGCATATAATACAGGAATGCTTCCTGAGATACAGGCGACGATCCGGCAACCAGTTGTCAAGAACATGATGAAAGCCCTATACTTTCAGTTTACCGTTGGAGTTCTACCGTTATATCTGGTTACCTTTGCAGGGTACTGGGCATATGGATCTTCAACACAAACTTTTTTGCTGAATAATGTTAATGGTCCAATCTGGGTGAAGGCAGTGGCCAATATTACAGCCTTTCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAAGGGAGTGCTCTAGCTTTTAAGAACTTGTCATTTAGAATTTTGGTAAGAGGTGGTTACATGACTTTGAATACATTTGTATCAGCTCTTTTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTAGTGGCAAATAAGACCAAACTAACTTCCATTCAAAAGCTTTGGCATTGGATCAACATTTGGTTCTTTGCTATCATGTCTGTTGCAGCAACTATTGCAGCGCTGCGGCTTATTGCTTTAGATTCCAAAACTTATCATGTTTTCGCCGATTTATGA 1152 0.3932 MVPLGWIGGVVGLILATAISLYANALIAMLHEFGGTRHIRYRDLAGYIYGRKAYSLTWTLQYVNLFMINTGYIILAGSALKAVYVLLRDDDQMKLPHFIAIAGLVCAMFAICIPHLSALGVWLGFSTVLSLAYIVIALVLSLRDGIKSPARDYSVPGTSTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTQTFLLNNVNGPIWVKAVANITAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRILVRGGYMTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANKTKLTSIQKLWHWINIWFFAIMSVAATIAALRLIALDSKTYHVFADL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04287 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 365 - -
Trre9g04287 383 Pfam Transmembrane amino acid transporter protein 1 366 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04287 Trre-Chr9 50777619 50781989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04287 1 383 Organic Solute Cotransporters AT2G39890 78.068 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04287 K26247 - gmx:100500168 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04287 9 50777619 50781989 Trre9g04287 9 50777619 50781989 ECH
Trre5g02001 5 14909764 14913190 Trre9g04287 9 50777619 50781989 PCT