Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02001 ATGGGAAAAGGAGGCGGTGAAATGAATGATCCAAACAAGATACATGATGATACTGTTGAAATTCCAGAAACCGCACATCAAATTAGCAGCGATTCATGGCTTCAAGTTGCTTTCATCCTCACCACCGGAATAAACAGTGCTTATGTGCTCGGATATTCCGGCACCATCATGGTTCCACTGGGTTGGGTGGGAGGTGTAGTTGGTCTTCTTCTTGCTACCTTAATATCACTCTATGCTAATGCTCTTGTTGCTATGCTCCATGAATATGGAGGGACAAGACACATTAGATATAGAGATCTTGCTGGATATATATACGGTAAAAAGGCATATTCAACTACATGGGCTCTGCAGTATATCAATCTTTTTATGATAAATACTGGTTTCATCATTTTGGCTGGTTCAGCCTTGAAAGCTGCTTATACCTTGTTTAGAGATGATGGTCAGCTGAAGCTTCCATATTGTATAGCTATAGCTGGACTTGTGTGTGCATTGTTTGCCATTTGTATTCCTCATCTTTCAGCTCTTGGAATTTGGTTGGGATTTTCAACAGTCTTCAGCATGGCATACATTATCATAGCATTCACGCTATCAATTAAAGATGGAATACAATCACCACCTCGAGATTACAGTATTCCAGGAGGCGGTGCAAATAAAGTATTTGAAACAATTGGGGCGTCTGCTAACCTAGTGTTTGCATACAATACAGGCATGCTTCCTGAGATACAGGCAACAATAAAGCAGCCAGTTGTCAAGAACATGATGAAATCCCTGTACTTTCAGTTTTCCGTCGGAGTTGTACCATTGTACATGGTTACCTTTGCAGGATATTGGGCTTATGGATCTTCGACAGACGCATATTTACTGAATAATGTGAATGGTCCAGTTTGGGTGAAGGCTTTGGCCAATATTACAGCCTTCCTTCAATCAGTCATTGCATTACATATATTTGCAAGTCCAATGTATGAGTATTTGGATACAAAAAATGCGATCAAAGGAAGTGCATTGAATATTAAGAACTTATCATATAGAATCATGGTAAGAGGTGGTTACCTGGCCTTTAATACATTCGTGGCGGCTCTCCTACCGTTCCTCGGCGATTTCATGAGTCTCACGGGAGCAATCAGCACATTTCCGCTTACATTTATTCTTGCAAATCATATGTATCTAGTGGCGAAAAAGGACAAATTATCAAGTGTACAGAAACTATGGCATTGGATCAACATTGTTGGCTTTTGCATCATGTCTGTTGCAGCAACAGTTGCAGCACTACGGCTTATTTCTGTAGACTCCAAAACATATCATATTTTTGCAGATATTTGA 1320 0.4015 MGKGGGEMNDPNKIHDDTVEIPETAHQISSDSWLQVAFILTTGINSAYVLGYSGTIMVPLGWVGGVVGLLLATLISLYANALVAMLHEYGGTRHIRYRDLAGYIYGKKAYSTTWALQYINLFMINTGFIILAGSALKAAYTLFRDDGQLKLPYCIAIAGLVCALFAICIPHLSALGIWLGFSTVFSMAYIIIAFTLSIKDGIQSPPRDYSIPGGGANKVFETIGASANLVFAYNTGMLPEIQATIKQPVVKNMMKSLYFQFSVGVVPLYMVTFAGYWAYGSSTDAYLLNNVNGPVWVKALANITAFLQSVIALHIFASPMYEYLDTKNAIKGSALNIKNLSYRIMVRGGYLAFNTFVAALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKDKLSSVQKLWHWINIVGFCIMSVAATVAALRLISVDSKTYHIFADI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02001 439 PANTHER OS05G0424000 PROTEIN-RELATED 28 421 - -
Trre5g02001 439 Pfam Transmembrane amino acid transporter protein 31 420 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02001 Trre-Chr5 14909764 14913190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02001 57 439 Organic Solute Cotransporters AT3G55740 73.890 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02001 K26247 - gmx:100778997 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02001 5 14909764 14913190 Trre5g02001 5 14909764 14913190 ECH
Trre5g02001 5 14909764 14913190 Trre9g04287 9 50777619 50781989 PCT